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Updated: Jun 24, 2025

Methods to Classify Cytoplasmic Foci as Mammalian Stress Granules
Published on: May 12, 2017
Concerted action of ataxin-2 and PABPC1-bound mRNA poly(A) tail in the formation of stress granules
Ryota Yamagishi1, Hiroto Inagaki1, Jun Suzuki1
1Department of Biological Chemistry, Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya 467-8603, Japan.
Abstract:
Stress induces global stabilization of the mRNA poly(A) tail (PAT) and the assembly of untranslated poly(A)-tailed mRNA into mRNPs that accumulate in stress granules (SGs). While the mechanism behind stress-induced global PAT stabilization has recently emerged, the biological significance of PAT stabilization under stress remains elusive. Here, we demonstrate that stress-induced PAT stabilization is a prerequisite for SG formation. Perturbations in PAT length impact SG formation; PAT shortening, achieved by overexpressing mRNA deadenylases, inhibits SG formation, whereas PAT lengthening, achieved by overexpressing their dominant negative mutants or downregulating deadenylases, promotes it. PABPC1, which specifically binds to the PAT, is crucial for SG formation. Complementation analyses reveal that the PABC/MLLE domain of PABPC1, responsible for binding PAM2 motif-containing proteins, plays a key role. Among them, ataxin-2 is a known SG component. A dominant-negative approach reveals that the PAM2 motif of ataxin-2 is essential for SG formation. Notably, ataxin-2 increases stress sensitivity, lowering the threshold for SG formation, probably by promoting the aggregation of PABPC1-bound mRNA. The C-terminal region is responsible for the self-aggregation of ataxin-2. These findings underscore the critical roles of mRNA PAT, PABPC1 and ataxin-2 in SG formation and provide mechanistic insights into this process.
Insights
Stress stabilizes mRNA poly(A) tails (PAT), a crucial step for stress granule (SG) formation. Proteins like PABPC1 and ataxin-2 are vital for this process, influencing SG assembly under cellular stress.
Area of Science:
- Molecular Biology
- Cellular Stress Response
- RNA Metabolism
Background:
- Cellular stress triggers mRNA poly(A) tail (PAT) stabilization and the formation of stress granules (SGs).
- The precise biological role of PAT stabilization during stress has been unclear.
- Recent advances shed light on PAT stabilization mechanisms but not its significance.
Purpose of the Study:
- To elucidate the biological significance of stress-induced PAT stabilization.
- To investigate the role of PAT length and associated proteins in SG formation.
- To uncover the mechanistic link between PAT, PABPC1, ataxin-2, and SG assembly.
Main Methods:
- Manipulating PAT length by overexpressing deadenylases or their dominant-negative mutants.
- Utilizing PABPC1 and ataxin-2 in complementation and dominant-negative assays.
- Investigating protein-protein interactions and aggregation properties.
Main Results:
- Stress-induced PAT stabilization is essential for SG formation.
- Altering PAT length directly impacts SG assembly; shortening inhibits, lengthening promotes.
- PABPC1 and its interaction with ataxin-2 via the PAM2 motif are critical for SGs.
- Ataxin-2 lowers the SG formation threshold, potentially via PABPC1-bound mRNA aggregation.
Conclusions:
- mRNA PAT, PABPC1, and ataxin-2 play critical roles in stress granule formation.
- PAT stabilization is a prerequisite for SG assembly under stress.
- Ataxin-2 modulates cellular stress sensitivity and SG formation dynamics.
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