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Updated: Jun 23, 2025

In Vitro SUMOylation Assay to Study SUMO E3 Ligase Activity
Published on: January 29, 2018
Targeting of SUMOylation leads to cBAF complex stabilization and disruption of the SS18::SSX transcriptome in
Konstantinos V Floros1,2, Carter K Fairchild1,3, Jinxiu Li4
1VCU Philips Institute, Virginia Commonwealth University School of Dentistry and Massey Comprehensive Cancer Center, Richmond VA, 23298 USA.
Abstract:
Synovial Sarcoma (SS) is driven by the SS18::SSX fusion oncoprotein and is ultimately refractory to therapeutic approaches. SS18::SSX alters ATP-dependent chromatin remodeling BAF (mammalian SWI/SNF) complexes, leading to the degradation of canonical (cBAF) complex and amplified presence of an SS18::SSX-containing non-canonical BAF (ncBAF or GBAF) that drives an SS-specific transcription program and tumorigenesis. We demonstrate that SS18::SSX activates the SUMOylation program and SSs are sensitive to the small molecule SAE1/2 inhibitor, TAK-981. Mechanistically, TAK-981 de-SUMOylates the cBAF subunit SMARCE1, stabilizing and restoring cBAF on chromatin, shifting away from SS18::SSX-ncBAF-driven transcription, associated with DNA damage and cell death and resulting in tumor inhibition across both human and mouse SS tumor models. TAK-981 synergized with cytotoxic chemotherapy through increased DNA damage, leading to tumor regression. Targeting the SUMOylation pathway in SS restores cBAF complexes and blocks the SS18::SSX-ncBAF transcriptome, identifying a therapeutic vulnerability in SS, positioning the in-clinic TAK-981 to treat SS.
Insights
Synovial sarcoma is driven by SS18::SSX, which disrupts chromatin remodeling. Targeting the SUMOylation pathway with TAK-981 restores normal complexes, inhibits tumor growth, and enhances chemotherapy efficacy.
Area of Science:
- Oncology
- Molecular Biology
- Chromatin Biology
Background:
- Synovial sarcoma (SS) is driven by the SS18::SSX fusion oncoprotein.
- SS18::SSX disrupts ATP-dependent chromatin remodeling BAF (SWI/SNF) complexes, promoting tumorigenesis.
Purpose of the Study:
- To investigate the therapeutic potential of targeting the SUMOylation pathway in SS.
- To elucidate the mechanism of action of the SAE1/2 inhibitor TAK-981 in SS.
Main Methods:
- Utilized small molecule inhibitor TAK-981 targeting SAE1/2 SUMOylation.
- Analyzed chromatin remodeling complex composition and transcriptional changes.
- Assessed tumor inhibition and synergistic effects with chemotherapy in SS models.
Main Results:
- SS is sensitive to TAK-981, which de-SUMOylates SMARCE1, restoring canonical BAF (cBAF) complexes.
- TAK-981 shifts transcription away from the SS18::SSX-ncBAF program, inducing DNA damage and cell death.
- TAK-981 demonstrated tumor inhibition in human and mouse SS models and synergized with chemotherapy for tumor regression.
Conclusions:
- Targeting the SUMOylation pathway represents a therapeutic vulnerability in SS.
- TAK-981 restores cBAF complexes and blocks oncogenic transcription, offering a potential treatment strategy for SS.
- TAK-981 is positioned for clinical use in treating SS, particularly in combination with chemotherapy.
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