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Synthesis of Masarimycin, a Small Molecule Inhibitor of Gram-Positive Bacterial Growth
Published on: January 7, 2022
Anti-MRSA activity of chlorophenyl pyrrolo benzodiazepines compound
Suresh K Mondal1, Sk Aftabul Alam2, Gourisankar Roymahapatra3
1Department of Bioscience and Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302, WB, India.
Abstract:
Antibiotic resistant is the major concern in public health to control the infectious diseases. MRSA (Methicillin-resistant Staphylococcus aureus) is a significant concern in healthcare settings due to its resistance to many antibiotics, including methicillin and other beta-lactams. MRSA infection difficult to treat and increases the risk of complications. Here, we have tested a series of highly condensed heterocyclic derivatives of pyrrolo[1,2-a][1,4]benzodiazepines. Compounds were tested against both, Gram-positive bacteria, Staphylococcus aureus and S. epidermidis, and Gram-negative bacteria, Escherichia coli and Pseudomonas aeruginosa, to assess the antimicrobial efficacy. Compared to Gram-negative bacteria, compounds showed much stronger antibacterial activity against Gram-positive bacteria. SM-5 [Ethyl2-(7-(4-chlorophenyl)-4-methoxy-6,7,8,13-tetrahydro-5H-benzo[e]benzo[5,6][1,4]diazepino[2,1-a]isoindol-15-yl)acetate] derivative was selected as best on the basis of higher therapeutic index among the tested compounds, showed MIC value of 7.81 µg. ml-1 against Staphylococcus strains. Molecular docking analysis between cell wall biosynthesis protein of S. aureus and SM-5 revealed that PBP2a showed the highest binding energy (-8.3 Kcal mol-1), followed by beta-lactam-inducible PBP4 (-7.7 Kcal mol-1), and lipoteichoic acid synthase (-7.5 Kcal mol-1) which is comparably higher than methicillin. Ground state energy calculations by DFT analysis revealed that compound SM-5 and SM-6, almost have equal electronegativity 0.11018 au which also satisfy the quality of the compound reactivity. Analysis of their biofilm inhibition in vitro and in silico toxicity analysis demonstrated their substantial potential to be a kind of future lead antibiotic.
Insights
New heterocyclic compounds show strong potential against antibiotic-resistant bacteria like Methicillin-resistant Staphylococcus aureus (MRSA). Compound SM-5 demonstrated significant antimicrobial activity and favorable binding to bacterial proteins, suggesting it could be a future lead antibiotic.
Area of Science:
- Medicinal Chemistry
- Microbiology
- Drug Discovery
Background:
- Antibiotic resistance is a critical global health challenge, particularly concerning infections caused by Methicillin-resistant Staphylococcus aureus (MRSA).
- MRSA poses significant treatment difficulties in healthcare settings due to its resistance to multiple antibiotics, including beta-lactams.
- Developing novel antimicrobial agents is crucial to combat the rising threat of antibiotic-resistant pathogens.
Purpose of the Study:
- To synthesize and evaluate a series of novel pyrrolo[1,2-a][1,4]benzodiazepine derivatives for antimicrobial activity.
- To identify potent compounds effective against Gram-positive bacteria, including MRSA.
- To investigate the mechanism of action and potential of these compounds as future antibiotics.
Main Methods:
- Synthesis of highly condensed heterocyclic derivatives of pyrrolo[1,2-a][1,4]benzodiazepines.
- Antimicrobial susceptibility testing against Gram-positive (Staphylococcus aureus, S. epidermidis) and Gram-negative (Escherichia coli, Pseudomonas aeruginosa) bacteria.
- Minimum Inhibitory Concentration (MIC) determination for efficacy assessment.
- Molecular docking studies targeting cell wall biosynthesis proteins of S. aureus.
- Density Functional Theory (DFT) analysis for compound reactivity.
- In vitro biofilm inhibition assays and in silico toxicity assessments.
Main Results:
- The synthesized compounds exhibited significantly stronger antibacterial activity against Gram-positive bacteria compared to Gram-negative bacteria.
- Compound SM-5 demonstrated the highest therapeutic index, with a Minimum Inhibitory Concentration (MIC) of 7.81 µg/mL against Staphylococcus strains.
- Molecular docking revealed strong binding affinities of SM-5 to key bacterial proteins, including PBP2a (-8.3 Kcal/mol), PBP4 (-7.7 Kcal/mol), and lipoteichoic acid synthase (-7.5 Kcal/mol), surpassing methicillin's binding.
- DFT analysis indicated favorable reactivity for compounds SM-5 and SM-6.
- In vitro and in silico studies confirmed substantial biofilm inhibition and acceptable toxicity profiles.
Conclusions:
- The novel pyrrolo[1,2-a][1,4]benzodiazepine derivatives show promising antimicrobial potential, particularly against Gram-positive pathogens.
- Compound SM-5 is identified as a lead candidate due to its potent activity, favorable binding interactions with bacterial targets, and biofilm inhibition capabilities.
- These findings highlight the potential of this chemical class as a source for developing new therapeutic agents to combat antibiotic resistance.
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