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Updated: Jun 23, 2025

Visualization of Bacterial Resistance using Fluorescent Antibiotic Probes
Published on: March 2, 2020
Rhodamine 19 Alkyl Esters as Effective Antibacterial Agents
Pavel A Nazarov1, Vladislav S Maximov2, Alexander M Firsov1
1Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.
SkQR1, a mitochondria-targeted antioxidant, shows strong antibacterial effects against Gram-positive bacteria but not Gram-negative bacteria. Its mechanism differs from SkQ1, accumulating in bacterial membranes.
Area of Science:
- Antimicrobial research
- Mitochondrial targeted antioxidants
- Bacterial membrane interactions
Background:
- Mitochondria-targeted antioxidants (MTAs) are explored for therapeutic applications and substance delivery.
- MitoQ and SkQ1 are well-studied MTAs; SkQR1 is a fluorescent rhodamine analog of SkQ1.
- Understanding MTA interactions with bacterial efflux pumps and membranes is crucial.
Purpose of the Study:
- To investigate the antibacterial activity of SkQR1 and related rhodamine derivatives.
- To determine the susceptibility of Gram-positive and Gram-negative bacteria to SkQR1.
- To explore the role of multidrug resistance (MDR) pumps in the efficacy of these compounds.
Main Methods:
- Antibacterial assays against various bacterial strains, including wild-type and mutant Escherichia coli.
- Assessment of SkQR1 and rhodamine ester efflux by the AcrAB-TolC MDR pump.
- Fluorescence correlation spectroscopy and fluorescence microscopy to study SkQR1 localization.
Main Results:
- SkQR1 exhibited potent antibacterial activity against Gram-positive bacteria (e.g., Staphylococcus aureus, Mycobacterium smegmatis) but minimal effect on Gram-negative bacteria.
- The AcrAB-TolC pump did not efflux SkQR1 or C12R1, unlike SkQ1.
- Rhodamine derivatives C4R1 and C2R1 showed efficacy against ΔtolC E. coli but were less effective against wild-type E. coli.
- SkQR1 was observed to accumulate in the bacterial membrane.
Conclusions:
- SkQR1 possesses significant antibacterial properties, particularly against Gram-positive bacteria, with a distinct mechanism from SkQ1.
- Bacterial efflux pumps play a role in the differential activity of some rhodamine derivatives.
- SkQR1 accumulates in bacterial membranes, suggesting it as a potential agent for membrane-associated studies, but caution is advised when presenting it as a simple fluorescent analog of SkQ1 for visualization.
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