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Enhancing semantic segmentation in chest X-ray images through image preprocessing: ps-KDE for pixel-wise substitution
Yuanchen Wang1, Yujie Guo1, Ziqi Wang1
1Department of Biomedical Informatics, Harvard Medical School, Boston, Massachusetts, United States of America.
A new preprocessing technique, ps-KDE, enhances contrast in medical images, improving deep learning for organ segmentation in chest X-rays. Ps-KDE shows superior performance over CLAHE for left lung segmentation.
Area of Science:
- Medical Imaging
- Deep Learning
- Image Preprocessing
Background:
- Deep learning semantic segmentation in medical imaging aids disease classification.
- Contrast Limited Adaptive Histogram Equalization (CLAHE) improves segmentation but has limitations.
- Improved contrast enhancement is needed for diverse medical imaging datasets.
Purpose of the Study:
- To introduce and evaluate ps-KDE, a novel preprocessing technique for medical image contrast enhancement.
- To assess the impact of ps-KDE on deep learning-based organ segmentation in chest X-rays.
- To compare ps-KDE's performance against CLAHE in segmenting major thoracic organs.
Main Methods:
- A novel ps-KDE technique was developed, augmenting image contrast using normalized pixel frequencies.
- A U-Net architecture with a ResNet34 backbone was utilized for segmentation.
- Five models were trained to segment the heart, left lung, right lung, left clavicle, and right clavicle.
Main Results:
- The ps-KDE model achieved a significantly higher Dice score (0.780) for left lung segmentation compared to CLAHE (0.717), p<0.01.
- Ps-KDE demonstrated greater robustness, with CLAHE models showing misclassifications in some test cases.
- The ps-KDE algorithm is publicly available for use.
Conclusions:
- Ps-KDE offers superior performance over existing techniques like CLAHE for specific lung region segmentation.
- This improved segmentation can benefit downstream applications such as disease classification and risk stratification.
- The findings suggest ps-KDE is a valuable tool for enhancing medical image analysis.
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