Determination of prognostic markers for COVID-19 disease severity using routine blood tests and machine learning
Tayná E Lima1, Matheus V F Ferraz1,2, Carlos A A Brito3
1Fundação Oswaldo Cruz, Instituto Aggeu Magalhães, Departamento de Virologia, Av. Professor Moraes Rego, s/n, Cidade Universitária, 50740-465 Recife, PE, Brazil.
Insights
Identifying COVID-19 severity risk factors is crucial. Machine learning identified five key biomarkers from routine blood tests to accurately predict severe disease, aiding clinical decisions.
Area of Science:
- * Medical Informatics
- * Clinical Pathology
- * Infectious Diseases
Background:
- * Identifying risk factors for COVID-19 severity is critical for patient care and resource allocation.
- * Current disease severity classification relies on non-standardized clinical parameters and blood tests, leading to conflicting data.
- * Machine learning (ML) offers a potential solution for developing standardized and accurate predictive models.
Purpose of the Study:
- * To construct and validate a machine learning (ML) model for predicting COVID-19 disease severity.
- * To identify key laboratory biomarkers associated with severe COVID-19 outcomes.
Main Methods:
- * A machine learning model was developed using electronic medical records and daily blood test results from 72 COVID-19 patients in Brazil.
- * Patients were diagnosed using RT-PCR and/or ELISA, with varying disease severity.
- * The model's predictive accuracy was assessed using the Receiver Operating Characteristic Area Under the Curve (ROC-AUC).
Main Results:
- * A combination of five laboratory biomarkers accurately predicted severe COVID-19 disease with a ROC-AUC of 0.80 ± 0.13.
- * The identified biomarkers include prothrombin activity, ferritin, serum iron, activated partial thromboplastin time (APTT), and monocytes.
- * The ML model demonstrated significant potential in predicting disease severity.
Conclusions:
- * The developed ML model effectively predicts COVID-19 severity using readily available laboratory data.
- * The identified biomarkers provide valuable insights into the pathophysiology of severe COVID-19.
- * This tool can aid in rationalizing clinical decision-making and optimizing patient care strategies.
Abstract:
The need for the identification of risk factors associated to COVID-19 disease severity remains urgent. Patients' care and resource allocation can be potentially different and are defined based on the current classification of disease severity. This classification is based on the analysis of clinical parameters and routine blood tests, which are not standardized across the globe. Some laboratory test alterations have been associated to COVID-19 severity, although these data are conflicting partly due to the different methodologies used across different studies. This study aimed to construct and validate a disease severity prediction model using machine learning (ML). Seventy-two patients admitted to a Brazilian hospital and diagnosed with COVID-19 through RT-PCR and/or ELISA, and with varying degrees of disease severity, were included in the study. Their electronic medical records and the results from daily blood tests were used to develop a ML model to predict disease severity. Using the above data set, a combination of five laboratorial biomarkers was identified as accurate predictors of COVID-19 severe disease with a ROC-AUC of 0.80 ± 0.13. Those biomarkers included prothrombin activity, ferritin, serum iron, ATTP and monocytes. The application of the devised ML model may help rationalize clinical decision and care.
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