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Updated: Jun 22, 2025

Automated System for Single Molecule Fluorescence Measurements of Surface-immobilized Biomolecules
Published on: November 2, 2009
Multiscale modeling of surface enhanced fluorescence
Pablo Grobas Illobre1, Piero Lafiosca1, Teresa Guidone1
1Scuola Normale Superiore Piazza dei Cavalieri 7 56126 Pisa Italy tommaso.giovannini@sns.it chiara.cappelli@sns.it.
Abstract:
The fluorescence response of a chromophore in the proximity of a plasmonic nanostructure can be enhanced by several orders of magnitude, yielding the so-called surface-enhanced fluorescence (SEF). An in-depth understanding of SEF mechanisms benefits from fully atomistic theoretical models because SEF signals can be non-trivially affected by the atomistic profile of the nanostructure's surface. This work presents the first fully atomistic multiscale approach to SEF, capable of describing realistic structures. The method is based on coupling density functional theory (DFT) with state-of-the-art atomistic electromagnetic approaches, allowing for reliable physically-based modeling of molecule-nanostructure interactions. Computed results remarkably demonstrate the key role of the NP morphology and atomistic features in quenching/enhancing the fluorescence signal.
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