[Clinical phenotype and genetic analysis of a child with Intellectual developmental disorder and epilepsy due to
Zaoye Xie1, Chengyan Li, Chaohong Chen
1Children's Medical Center, the Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong 524000, China. aodang@21cn.com.
Insights
A novel CLTC gene variant was identified in an infant with intellectual developmental disorder and epilepsy. This likely pathogenic variant aids in diagnosing and treating similar pediatric neurological conditions.
Area of Science:
- Genetics
- Neurology
- Pediatrics
Background:
- Intellectual developmental disorder (IDD) and epilepsy are complex neurological conditions often with an underlying genetic cause.
- Identifying specific genetic variants is crucial for accurate diagnosis and targeted treatment in affected children.
Purpose of the Study:
- To investigate the clinical presentation and genetic etiology of a pediatric patient diagnosed with intellectual developmental disorder and epilepsy.
- To identify and characterize the genetic basis of neurological symptoms in a young infant.
Main Methods:
- Clinical data collection from a pediatric patient admitted in February 2021.
- Whole exome sequencing (WES) performed on the patient and parents.
- Sanger sequencing used to confirm the identified genetic variant.
Main Results:
- The patient presented with severe developmental delay, seizures, and respiratory issues from the neonatal period.
- Cerebral MRI showed bilateral cerebellar hypoplasia; EEG revealed abnormal sharp waves.
- Whole exome sequencing identified a de novo, likely pathogenic missense variant (c.3196G>A; p.Glu1066Lys) in the CLTC gene.
Conclusions:
- The identified CLTC gene variant (p.Glu1066Lys) is strongly implicated in the patient's intellectual disability and epilepsy.
- This genetic finding supports the diagnosis and guides potential therapeutic strategies for the child.
Objective:
To explore the clinical features and genetic basis for a child with Intellectual developmental disorder (IDD) and epilepsy.
Methods:
A child who was admitted to the Children's Medical Center of the Affiliated Hospital of Guangdong Medical University in February 2021 was selected as the study subject. Clinical data of the child was collected. Peripheral blood samples of the child and her parents were collected and subjected to whole exome sequencing (WES). Candidate variant was verified by Sanger sequencing.
Results:
The patient, a 3-month-and-27-day female infant, had developed the symptoms in the neonatal period, which included severe developmental delay, respiratory difficulties and pauses, increased muscle tone of four limbs, feeding difficulty, and seizures. Cerebral MRI revealed bilateral cerebellar hypoplasia, and video EEG showed slightly increased sharp waves emanating predominantly from the right parietal, occipital, and posterior temporal regions. WES revealed that she has harbored a missense c.3196G>A (p.Glu1066Lys) variant of the CLTC gene, which was confirmed to be de novo by Sanger sequencing. Based on the guideline from the American College of Medical Genetics and Genomics (ACMG), the variant was classified as likely pathogenic (PS2+PM2_Supporting+PP3).
Conclusion:
The c.3196G>A (p.Glu1066Lys) missense variant of the CLTC gene probably underlay the pathogenesis in this child. Above finding has facilitated her diagnosis and treatment.
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