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Updated: Jun 22, 2025

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
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RIBAP: a comprehensive bacterial core genome annotation pipeline for pangenome calculation beyond the species level

Kevin Lamkiewicz1, Lisa-Marie Barf1, Konrad Sachse1

  • 1RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, Leutragraben 1, Jena, 07743, Germany.

Genome Biology
|July 2, 2024
PubMed

Keywords:
BacteriaClusteringCore genesInteger linear programmingNextflowPangenomePipelineProkaryote

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