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Autism spectrum disorder (ASD) is a neurodevelopmental condition marked by persistent deficits in social communication and interaction alongside restrictive and repetitive behaviors or interests. ASD is sometimes accompanied by intellectual impairment.
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Sex-Differential Gene Expression in Developing Human Cortex and Its Intersection With Autism Risk Pathways.

Lee T Kissel1, Sirisha Pochareddy2, Joon-Yong An3,4,5

  • 1Neuroscience Training Program, University of Wisconsin-Madison, Madison, Wisconsin.

Biological Psychiatry Global Open Science
|July 3, 2024
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Summary

Sex-differential gene expression in the prenatal human cortex is limited. Meta-analysis revealed sex-differentially expressed genes (sex-DEGs) involved in neural development, but not significantly overlapping with autism spectrum disorder (ASD) risk genes.

Keywords:
Autism spectrum disorderCortexGene expressionNeurodevelopmentRNA-seqSex differences

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Area of Science:

  • Neuroscience
  • Genetics
  • Developmental Biology

Background:

  • Autism spectrum disorder (ASD) shows a male-biased prevalence, potentially linked to sex-differential biology.
  • Transcriptomic sex differences in the developing human brain are not fully understood due to limited sample sizes.

Purpose of the Study:

  • To investigate sex-differential gene expression and co-expression in the prenatal human cortex.
  • To explore the intersection of neurotypical sex differences with autism spectrum disorder (ASD) biology.

Main Methods:

  • Performed a meta-analysis of bulk RNA sequencing data from 273 prenatal brain cortex donors.
  • Conducted sex-differential expression and co-expression network analyses.
  • Tested for enrichment of ASD risk genes within identified sex-differentially expressed genes (sex-DEGs) and modules.

Main Results:

  • Identified 101 significant sex-DEGs, including Y-chromosome, X-chromosome inactivation-impacted, and autosomal genes.
  • Found no preferential overlap between known ASD risk genes and prenatal cortical sex-DEGs.
  • Discovered one male-specific co-expression module enriched for immune signaling in one dataset.

Conclusions:

  • Sex-differential gene expression is minimal in the prenatal human cortex.
  • Identified sex-DEGs encode proteins crucial for neural development.
  • The lack of overlap with ASD risk genes suggests sex-specific ASD mechanisms may operate elsewhere or later in development.