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An Intestinal Gut Organ Culture System for Analyzing Host-Microbiota Interactions
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Integrating host and microbiome biology using holo-omics.

Carl M Kobel1, Jenny Merkesvik2, Idun Maria Tokvam Burgos3

  • 1Faculty of Biosciences, Norwegian University of Life Sciences, Ås, Norway. velma.tea.essi.aho@nmbu.no.

Molecular Omics
|July 4, 2024
PubMed
Summary

Holo-omics integrates host and microbiome data to study the holobiont. This approach enhances understanding of host-microbiome interactions for biotechnological applications.

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Area of Science:

  • Microbiology
  • Systems Biology
  • Genomics

Background:

  • The holobiont is a biological system comprising a host and its associated microbes.
  • Microbiome stability offers metabolic benefits to the host.
  • Understanding host-microbiome interactions is crucial for holobiont homeostasis.

Purpose of the Study:

  • To provide an overview of beneficial host-microbiome systems.
  • To propose and discuss methodological frameworks for studying host-microbiome interactions.
  • To advance the understanding of host-microbiome interplay.

Main Methods:

  • Review of existing literature on host-microbiome systems.
  • Proposal of methodological frameworks for investigating host-microbiome interactions.
  • Discussion of challenges and future directions in holo-omics research.

Main Results:

  • Identification of beneficial host-microbiome relationships.
  • Outlined methodological approaches for studying these interactions.
  • Highlighted the potential for biotechnological applications.

Conclusions:

  • Holo-omics is a promising field for understanding holobiont function.
  • Methodological advancements are key to improving biological resolution.
  • Further research will enhance interpretations and applications of host-microbiome interplay.