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Beyond black-box models: explainable AI for embryo ploidy prediction and patient-centric consultation
Thi-My-Trang Luong1,2,3, Nguyen-Tuong Ho3,4, Yuh-Ming Hwu3
1International Master Program in Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.
Journal of Assisted Reproduction and Genetics
|July 4, 2024
Summary
Explainable AI (XAI) models improve embryo ploidy prediction accuracy and transparency. The Random Forest model, enhanced by SHAP and LIME, identified key factors like maternal age for better embryo selection.
Area of Science:
- Reproductive Medicine
- Artificial Intelligence in Healthcare
- Genetics and Genomics
Background:
- Predicting embryo ploidy status is crucial for successful in vitro fertilization (IVF).
- Traditional methods often lack accuracy and transparency in embryo assessment.
- Explainable Artificial Intelligence (XAI) offers a potential solution for improving predictive models.
Purpose of the Study:
- To evaluate the effectiveness of an XAI model in predicting embryo ploidy status.
- To enhance the accuracy and transparency of embryo selection in IVF.
- To identify key factors influencing embryo ploidy using AI-driven insights.
Main Methods:
- Retrospective analysis of 1908 blastocyst embryos with ploidy status, morphokinetic, and clinical data.
- Trained six machine learning (ML) models, including Random Forest (RF), on distinct embryo datasets.
- Interpreted ML model performance using XAI techniques: SHapley Additive exPlanations (SHAP) and Local Interpretable Model-agnostic Explanations (LIME).
Main Results:
- The RF model demonstrated superior performance, achieving an accuracy of 0.749 and AUC of 0.808 for all-grade embryos (AGE).
- External validation showed RF accuracy of 0.714 and AUC of 0.750.
- SHAP analysis identified maternal age, paternal age, time to blastocyst, and day 5 morphology grade as significant predictors.
Conclusions:
- XAI algorithms can significantly enhance the accuracy and transparency of embryo ploidy prediction.
- The developed model aids in optimizing embryo selection for patient-centric consultation.
- XAI provides reliable and transparent insights, improving decision-making in IVF.

