Related Experiment Video
Updated: Jun 21, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Dissecting the association between gut microbiota, body mass index and specific depressive symptoms: a mediation
Tong Yu1,2, Chengfeng Chen2, Yuqing Yang1,2
1Department of Clinical Psychology, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, Guangdong, China.
Background:
Observational studies highlight the association between gut microbiota (GM) composition and depression; however, evidence for the causal relationship between GM and specific depressive symptoms remains lacking.
Aims:
We aimed to evaluate the causal relationship between GM and specific depressive symptoms as well as the mediating role of body mass index (BMI).
Methods:
We performed a two-sample Mendelian randomisation (MR) analysis using genetic variants associated with GM and specific depressive symptoms from genome-wide association studies. The mediating role of BMI was subsequently explored using mediation analysis via two-step MR.
Results:
MR evidence suggested the Bifidobacterium genus (β=-0.03; 95% CI -0.05 to -0.02; p<0.001 and β=-0.03; 95% CI -0.05 to -0.02; p<0.001) and Actinobacteria phylum (β=-0.04; 95% CI -0.06 to -0.02; p<0.001 and β=-0.03; 95% CI -0.05 to -0.03; p=0.001) had protective effects on both anhedonia and depressed mood. The Actinobacteria phylum also had protective effects on appetite changes (β=-0.04; 95% CI -0.06 to -0.01; p=0.005), while the Family XI had an antiprotective effect (β=0.03; 95% CI 0.01 to 0.04; p<0.001). The Bifidobacteriaceae family (β=-0.01; 95% CI -0.02 to -0.01; p=0.001) and Actinobacteria phylum (β=-0.02; 95% CI -0.03 to -0.01; p=0.001) showed protective effects against suicidality. The two-step MR analysis revealed that BMI also acted as a mediating moderator between the Actinobacteria phylum and appetite changes (mediated proportion, 34.42%) and that BMI partially mediated the effect of the Bifidobacterium genus (14.14% and 8.05%) and Actinobacteria phylum (13.10% and 8.31%) on both anhedonia and depressed mood.
Conclusions:
These findings suggest a potential therapeutic effect of Actinobacteria and Bifidobacterium on both depression and obesity. Further studies are required to translate these findings into clinical practice.
Related Concept Videos
Depressive Disorders: Etiology
Biological Factors in Depression
Biological predispositions significantly influence the risk of developing depressive disorders. Genetic studies highlight the role of variations in the serotonin transporter...
Anatomy of the Intestines
Small Intestines
The small intestine is an ~7 meter-long tube with an inner diameter of just 2.5 cm. Since most nutrients are absorbed here, the inner lining of the...
Bulimia Nervosa
Irritable Bowel Syndrome I: Introduction
IBS is a chronic condition that can persist over a long period or recur frequently.
The pathogenesis of IBS involves a complex interplay of the following factors:
Altered...
Depression: Overview
Regression Toward the Mean

