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Mechanisms of Resistance to Oncogenic KRAS Inhibition in Pancreatic Cancer
Julien Dilly1,2,3, Megan T Hoffman3,4, Laleh Abbassi1,2,3
1Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Abstract:
KRAS inhibitors demonstrate clinical efficacy in pancreatic ductal adenocarcinoma (PDAC); however, resistance is common. Among patients with KRASG12C-mutant PDAC treated with adagrasib or sotorasib, mutations in PIK3CA and KRAS, and amplifications of KRASG12C, MYC, MET, EGFR, and CDK6 emerged at acquired resistance. In PDAC cell lines and organoid models treated with the KRASG12D inhibitor MRTX1133, epithelial-to-mesenchymal transition and PI3K-AKT-mTOR signaling associate with resistance to therapy. MRTX1133 treatment of the KrasLSL-G12D/+; Trp53LSL-R172H/+; p48-Cre (KPC) mouse model yielded deep tumor regressions, but drug resistance ultimately emerged, accompanied by amplifications of Kras, Yap1, Myc, Cdk6, and Abcb1a/b, and co-evolution of drug-resistant transcriptional programs. Moreover, in KPC and PDX models, mesenchymal and basal-like cell states displayed increased response to KRAS inhibition compared to the classical state. Combination treatment with KRASG12D inhibition and chemotherapy significantly improved tumor control in PDAC mouse models. Collectively, these data elucidate co-evolving resistance mechanisms to KRAS inhibition and support multiple combination therapy strategies. Significance: Acquired resistance may limit the impact of KRAS inhibition in patients with PDAC. Using clinical samples and multiple preclinical models, we define heterogeneous genetic and non-genetic mechanisms of resistance to KRAS inhibition that may guide combination therapy approaches to improve the efficacy and durability of these promising therapies for patients. See related commentary by Marasco and Misale, p. 2018.
Insights
KRAS inhibitors show promise in pancreatic cancer but resistance develops. New research identifies genetic and non-genetic resistance mechanisms, supporting combination therapies for better patient outcomes.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- KRAS inhibitors are effective against pancreatic ductal adenocarcinoma (PDAC).
- Acquired resistance frequently limits the clinical benefit of KRAS inhibitors in PDAC patients.
- Understanding resistance mechanisms is crucial for improving treatment efficacy.
Purpose of the Study:
- To elucidate the genetic and non-genetic mechanisms of acquired resistance to KRAS inhibition in PDAC.
- To identify potential combination therapy strategies to overcome resistance.
Main Methods:
- Analysis of patient samples with acquired resistance to KRAS inhibitors.
- Treatment of PDAC cell lines, organoids, and KPC mouse models with KRAS inhibitors.
- Genomic profiling (mutations, amplifications) and transcriptional analysis.
- Evaluation of combination therapy with KRAS inhibitors and chemotherapy.
Main Results:
- Acquired resistance involved mutations in PIK3CA and KRAS, and amplifications of KRAS, MYC, MET, EGFR, and CDK6.
- Epithelial-to-mesenchymal transition and PI3K-AKT-mTOR signaling were associated with resistance to MRTX1133.
- Kras, Yap1, Myc, Cdk6, and Abcb1a/b amplifications and resistant transcriptional programs emerged in KPC models.
- Mesenchymal and basal-like cell states showed increased sensitivity to KRAS inhibition.
- Combination therapy with KRASG12D inhibition and chemotherapy improved tumor control.
Conclusions:
- KRAS inhibition in PDAC is associated with diverse co-evolving resistance mechanisms.
- Combination strategies, including chemotherapy, may enhance the efficacy and durability of KRAS inhibitors.
- Identifying resistance mechanisms guides the development of improved therapeutic approaches for PDAC.
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