Screening of the PA14NR Transposon Mutant Library Identifies Genes Involved in Resistance to Bacteriophage Infection
Peiying Ho1, Linh Chi Dam1,2, Wei Ren Ryanna Koh1,3
1Antimicrobial Resistance Interdisciplinary Research Group (AMR IRG), Singapore-MIT Alliance for Research and Technology (SMART) Centre, Singapore 117576, Singapore.
Abstract:
Multidrug-resistant P. aeruginosa infections pose a serious public health threat due to the rise in antimicrobial resistance. Phage therapy has emerged as a promising alternative. However, P. aeruginosa has evolved various mechanisms to thwart phage attacks, making it crucial to decipher these resistance mechanisms to develop effective therapeutic strategies. In this study, we conducted a forward-genetic screen of the P. aeruginosa PA14 non-redundant transposon library (PA14NR) to identify dominant-negative mutants displaying phage-resistant phenotypes. Our screening process revealed 78 mutants capable of thriving in the presence of phages, with 23 of them carrying insertions in genes associated with membrane composition. Six mutants exhibited total resistance to phage infection. Transposon insertions were found in genes known to be linked to phage-resistance such as galU and a glycosyl transferase gene, as well as novel genes such as mexB, lasB, and two hypothetical proteins. Functional experiments demonstrated that these genes played pivotal roles in phage adsorption and biofilm formation, indicating that altering the bacterial membrane composition commonly leads to phage resistance in P. aeruginosa. Importantly, these mutants displayed phenotypic trade-offs, as their resistance to phages inversely affected antibiotic resistance and hindered biofilm formation, shedding light on the complex interplay between phage susceptibility and bacterial fitness. This study highlights the potential of transposon mutant libraries and forward-genetic screens in identifying key genes involved in phage-host interactions and resistance mechanisms. These findings support the development of innovative strategies for combating antibiotic-resistant pathogens.
Insights
Identifying phage resistance mechanisms in Pseudomonas aeruginosa is key to effective phage therapy. This study found that altering bacterial membrane composition can confer phage resistance, but may impact antibiotic susceptibility and biofilm formation.
Area of Science:
- Microbiology
- Bacteriology
- Genetics
Background:
- Multidrug-resistant *Pseudomonas aeruginosa* infections are a significant global health concern.
- Antimicrobial resistance necessitates alternative treatments like phage therapy.
- Bacterial resistance mechanisms against phages impede therapeutic development.
Purpose of the Study:
- To identify genes conferring phage resistance in *P. aeruginosa* using a forward-genetic screen.
- To understand the role of bacterial membrane composition in phage-host interactions.
- To investigate potential trade-offs associated with phage resistance.
Main Methods:
- Utilized a *P. aeruginosa* PA14 non-redundant transposon mutant library (PA14NR) for screening.
- Conducted forward-genetic screens to identify phage-resistant mutants.
- Performed functional experiments to validate gene roles in phage adsorption and biofilm formation.
Main Results:
- Identified 78 mutants resistant to phages, with 23 affecting membrane composition genes.
- Discovered six mutants with complete phage resistance.
- Found transposon insertions in known resistance genes (*galU*) and novel genes (*mexB*, *lasB*).
- Demonstrated that membrane alterations impact phage adsorption and biofilm formation.
- Observed inverse correlations between phage resistance, antibiotic resistance, and biofilm formation.
Conclusions:
- Bacterial membrane composition is a critical factor in *P. aeruginosa* phage resistance.
- Transposon screening effectively identifies genes involved in phage-host interactions.
- Phage resistance mechanisms can lead to fitness costs, influencing antibiotic susceptibility and virulence.
- Findings support the development of novel strategies against antibiotic-resistant bacteria using phage therapy.
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