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FDI: A MATLAB tool for computing the fractal dimension index of sources reconstructed from EEG data
Juan Ruiz de Miras1, Adenauer G Casali2, Marcello Massimini3
1Department of Software Engineering, University of Granada, Granada, Spain.
We present open-source software for calculating the fractal dimension index (FDI) from EEG data, enabling easier analysis of brain activity complexity. This tool aids neuroscientists in studying neurological disorders.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Biophysics
Background:
- Fractal dimension (FD) quantifies neural complexity.
- Fractal Dimension Index (FDI) assesses spatiotemporal complexity in EEG signals.
- Existing FDI methods lack standardization and accessible tools.
Purpose of the Study:
- Introduce open-source MATLAB software for calculating FDI from EEG data.
- Provide a standardized and accessible tool for FDI measurement.
- Facilitate wider adoption of FDI in neuroscience research.
Main Methods:
- Developed open-source MATLAB software named FDI.
- Integrated CUDA for GPU acceleration to optimize performance.
- Ensured compatibility with pre-processed data from Brainstorm and EEGLab.
Main Results:
- The FDI software efficiently processes large-scale EEG data.
- Demonstrated FDI applicability in two neuroimaging studies.
- Provided free access to MATLAB source code and a Windows executable.
Conclusions:
- Neuroscientists can now readily apply FDI to investigate cortical activity complexity.
- The software promotes standardized FDI analysis in research.
- Facilitates deeper understanding of brain activity complexity.
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