Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity

Henry Quach1,2, Spencer Farrell3, Ming Jia Michael Wu1

  • 1Program in Developmental and Stem Cell Biology, Hospital for Sick Children, Toronto, Ontario, Canada.

Nature Communications
|July 13, 2024
PubMed

Insights

This study maps over 150,000 single cells in developing human lungs, revealing progenitor cells expressing cystic fibrosis conductance transmembrane regulator (CFTR) and their differentiation pathways. It benchmarks stem cell models against native lung development.

Area of Science:

  • Developmental Biology
  • Genomics
  • Cell Biology

Background:

  • Understanding human fetal lung development is crucial for identifying causes of congenital defects and diseases.
  • The pseudoglandular stage is a critical period for lung organogenesis.

Purpose of the Study:

  • To create a comprehensive single-cell atlas of the developing human lung.
  • To characterize progenitor cell populations and their differentiation trajectories.
  • To benchmark human pluripotent stem cell-derived lung models.

Main Methods:

  • Single-cell RNA sequencing of 19 human fetal lung tissues (10-19 gestational weeks).
  • Spatial transcriptomics to analyze cell-cell interactions and spatial organization.
  • Analysis of gene expression patterns, including CFTR, to identify cell lineages.

Main Results:

  • Detailed mapping of over 150,000 single cells, revealing dynamic developmental trajectories.
  • Identification of progenitor cells expressing high levels of CFTR, which give rise to specialized epithelial cells.
  • Characterization of temporal regulation of signaling pathways governing cell differentiation and emergence.
  • Validation of human pluripotent stem cell-derived lung models exhibiting similar developmental patterns.

Conclusions:

  • This study provides an unprecedented single-cell resolution atlas of human fetal lung development.
  • It elucidates the complex temporal and spatial dynamics of cell lineage specification.
  • The findings offer a valuable resource for studying lung development, disease, and regenerative medicine applications.

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