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Related Experiment Video

Updated: Jun 21, 2025

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CURE: A deep learning framework pre-trained on large-scale patient data for treatment effect estimation.

Ruoqi Liu1, Pin-Yu Chen2, Ping Zhang1,3,4

  • 1Department of Computer Science and Engineering, The Ohio State University, 2015 Neil Avenue, Columbus, OH 43210, USA.

Patterns (New York, N.Y.)
|July 15, 2024
PubMed
Summary
This summary is machine-generated.

CURE, a new framework for causal treatment effect estimation (TEE), uses unlabeled patient data for pre-training and fine-tuning on labeled data. This approach improves TEE accuracy, outperforming existing methods and aiding clinical trial analysis.

Keywords:
pre-training and fine-tuningreal-world patient datatreatment effect estimation

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Area of Science:

  • Biostatistics
  • Machine Learning
  • Health Informatics

Background:

  • Treatment effect estimation (TEE) is crucial for identifying causal effects of treatments.
  • Current machine learning methods for TEE struggle with limited labeled data.
  • Observational data presents challenges for accurate TEE.

Purpose of the Study:

  • To propose CURE (Causal treatment effect estimation), a novel pre-training and fine-tuning framework for TEE.
  • To enhance TEE performance using large-scale unlabeled patient data.
  • To develop a robust method for estimating heterogeneous treatment effects.

Main Methods:

  • CURE employs a pre-training phase on unlabeled patient data to learn contextual representations.
  • A sequence encoding approach is used to embed structure and time in longitudinal patient data.
  • The framework is fine-tuned on labeled data for specific TEE tasks.

Main Results:

  • CURE significantly outperforms state-of-the-art methods in TEE.
  • Achieved a 7% increase in area under the precision-recall curve.
  • Demonstrated an 8% rise in precision for estimating heterogeneous effects.

Conclusions:

  • CURE effectively estimates causal treatment effects from observational data.
  • The framework's performance was validated against four randomized clinical trials.
  • CURE shows potential to supplement traditional clinical trial methodologies.