Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Graph Theory Identifies Autistic Patterns in the Prefrontal Circuit of a Mouse Model of Autism.

Research square·2026
Same author

A device for simultaneous neural recording and drug infusion in rodents.

HardwareX·2025
Same author

Patchy striatonigral neurons modulate locomotor vigor in response to environmental valence.

eLife·2025
Same author

Broad brain biodistribution conferred by an AAV to restore TDP-43 function mitigates Frontotemporal Demenia-like deficits.

bioRxiv : the preprint server for biology·2025
Same author

Distinct prelimbic cortex ensembles encode response execution and inhibition.

Proceedings of the National Academy of Sciences of the United States of America·2025
Same author

Using miniscopes and deep learning to compare neurobehavioral representations of psychostimulant and opioid self-administration.

Addiction neuroscience·2025

Related Experiment Video

Updated: Jun 21, 2025

Functional Calcium Imaging in Developing Cortical Networks
16:33

Functional Calcium Imaging in Developing Cortical Networks

Published on: October 22, 2011

38.9K

LEARNING COMPACT DNN MODELS FOR BEHAVIOR PREDICTION FROM NEURAL ACTIVITY OF CALCIUM IMAGING.

Xiaomin Wu1, Da-Ting Lin2, Rong Chen3

  • 1University of Maryland College park.

Journal of Signal Processing Systems
|July 15, 2024
PubMed
Summary

We developed efficient deep neural network (DNN) methods for extracting animal behavior information from calcium imaging neural signals. Our NeuroGRS tool automates this process, enabling streamlined analysis with minimal accuracy loss.

More Related Videos

Successful In vivo Calcium Imaging with a Head-Mount Miniaturized Microscope in the Amygdala of Freely Behaving Mouse
09:39

Successful In vivo Calcium Imaging with a Head-Mount Miniaturized Microscope in the Amygdala of Freely Behaving Mouse

Published on: August 26, 2020

12.2K
Stereotaxic Viral Injection and Gradient-Index Lens Implantation for Deep Brain In Vivo Calcium Imaging
11:11

Stereotaxic Viral Injection and Gradient-Index Lens Implantation for Deep Brain In Vivo Calcium Imaging

Published on: October 8, 2021

5.9K

Related Experiment Videos

Last Updated: Jun 21, 2025

Functional Calcium Imaging in Developing Cortical Networks
16:33

Functional Calcium Imaging in Developing Cortical Networks

Published on: October 22, 2011

38.9K
Successful In vivo Calcium Imaging with a Head-Mount Miniaturized Microscope in the Amygdala of Freely Behaving Mouse
09:39

Successful In vivo Calcium Imaging with a Head-Mount Miniaturized Microscope in the Amygdala of Freely Behaving Mouse

Published on: August 26, 2020

12.2K
Stereotaxic Viral Injection and Gradient-Index Lens Implantation for Deep Brain In Vivo Calcium Imaging
11:11

Stereotaxic Viral Injection and Gradient-Index Lens Implantation for Deep Brain In Vivo Calcium Imaging

Published on: October 8, 2021

5.9K

Area of Science:

  • Neuroscience
  • Computational Biology
  • Machine Learning

Background:

  • Calcium imaging is a powerful technique for monitoring neural activity.
  • Extracting meaningful information from complex neural signals remains a challenge.
  • Predicting animal behavior from neural data requires efficient analytical methods.

Purpose of the Study:

  • To develop efficient and accurate methods for information extraction from calcium imaging neural signals.
  • To create compact deep neural network (DNN) models for predictive modeling of animal behavior.
  • To introduce an automated software tool, NeuroGRS, for deriving these compact DNNs.

Main Methods:

  • Development of algorithms for systematic generation of compact DNN models.
  • Implementation of the Greedy inter-layer order with Random Selection of intra-layer units (GRS) algorithm.
  • Utilizing the NeuroGRS software tool for automated DNN derivation and application.

Main Results:

  • Demonstrated highly streamlined information extraction from brain calcium images.
  • Achieved minimal loss in accuracy compared to computationally expensive methods.
  • Validated the efficiency and accuracy of the proposed DNN models and NeuroGRS tool.

Conclusions:

  • The developed methods and NeuroGRS tool enable efficient and accurate behavioral prediction from calcium imaging data.
  • Compact DNNs derived through GRS offer a computationally advantageous approach.
  • This work facilitates advanced analysis of neural dynamics and associated behaviors.