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Updated: May 8, 2026

Robust DNA Isolation and High-throughput Sequencing Library Construction for Herbarium Specimens
Published on: March 8, 2018
Back to the future: Using herbarium specimens to isolate nodule-associated bacteria.
Renee H Petipas1, Amanda A Antoch1,2, Ashton A Eaker1
1Department of Plant Pathology Washington State University Pullman Washington USA.
Historic bacteria were successfully cultured from herbarium specimens of Medicago lupulina nodules. This breakthrough enables new research into plant-microbe interactions across time.
Area of Science:
- Microbiology
- Botany
- Evolutionary Biology
Background:
- Herbarium specimens are valuable resources for studying plant ecology and evolution.
- Current research primarily uses specimens for genetic material via culture-independent methods.
Purpose of the Study:
- To demonstrate the feasibility of culturing nodule-associated bacteria from herbarium specimens.
- To explore plant-microbe interactions at novel spatiotemporal scales using historic samples.
Main Methods:
- Historic and contemporary nodules from Medicago lupulina were used to establish a culture collection.
- Bacteria were isolated and identified from specimens collected in 1950, 2004, and 2015.
Main Results:
- Historic bacteria from 15 genera were successfully recovered from herbarium specimens.
- This is the first study to isolate historic bacteria from herbarium samples.
- While the primary symbiont Ensifer was not recovered, other potential nodulating and growth-promoting bacteria were identified.
Conclusions:
- Herbarium specimens offer a viable method for culturing historic bacteria, expanding research possibilities for plant-microbe interactions.
- Future studies should involve inoculating plants with historic strains to assess nodulation, plant phenotype, and fitness.
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