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Published on: September 17, 2021
Electron iso-density surfaces provide a thermodynamically consistent representation of atomic and molecular surfaces
Amin Alibakhshi1,2,3,4, Lars V Schäfer5
1Center for Theoretical Chemistry, Ruhr University Bochum, 44780, Bochum, Germany. amin.alibakhshi@ruhr-uni-bochum.de.
Defining atomic and molecular surfaces is now experimentally verifiable. A specific electron density cut-off of 0.0016 a.u. accurately represents molecular surfaces, bridging theory and experimental data.
Area of Science:
- Physical Chemistry
- Quantum Chemistry
- Materials Science
Background:
- The surface area of atoms and molecules is critical for material properties.
- Defining molecular surfaces precisely has been a long-standing challenge.
- Bader's definition of molecular surfaces as iso-density contours lacks experimental validation.
Purpose of the Study:
- To experimentally verify theoretical definitions of atomic and molecular surfaces.
- To determine a precise electron density cut-off value for representing molecular surfaces.
- To bridge the gap between quantum chemical calculations and experimental measurements.
Main Methods:
- Utilized a state-of-the-art experimental method based on thermodynamically effective (TE) surfaces.
- Studied a diverse set of 104 molecules.
- Compared experimental results with quantum chemical evaluations of iso-density surfaces.
Main Results:
- Demonstrated excellent agreement between experimental data and quantum chemical calculations.
- Identified an electron density cut-off of 0.0016 atomic units (a.u.) as a reliable surface representation.
- Achieved a mean unsigned percentage deviation of 1.6% and a correlation coefficient of 0.995.
Conclusions:
- The iso-density surface at 0.0016 a.u. electron density accurately represents atomic and molecular surfaces.
- This finding provides experimental validation for theoretical surface definitions.
- The study establishes a new standard for defining molecular surfaces experimentally.
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