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Sequential Patching Lattice for Image Classification and Enquiry: Streamlining Digital Pathology Image Processing
Areej Alsaafin1, Peyman Nejat1, Abubakr Shafique1
1KIMIA Lab, Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, Minnesota.
We developed Sequential Patching Lattice for Image Classification and Enquiry (SPLICE), an unsupervised algorithm that creates compact representations of digital pathology whole-slide images (WSIs). SPLICE significantly reduces storage needs and improves computational efficiency for AI-driven analysis.
Area of Science:
- Computational pathology
- Digital pathology
- Artificial intelligence in histopathology
Background:
- Digital pathology and AI are transforming histopathology.
- Whole-slide images (WSIs) are large and complex, posing processing challenges.
- Existing methods for WSI processing are often impractical or too expensive.
Purpose of the Study:
- To introduce Sequential Patching Lattice for Image Classification and Enquiry (SPLICE), an unsupervised patching algorithm.
- To condense histopathology WSIs into a compact set of representative patches, minimizing redundancy.
- To improve the efficiency of image retrieval, processing, and analysis in digital pathology archives.
Main Methods:
- Developed SPLICE, an unsupervised algorithm for WSI patching.
- SPLICE sequentially analyzes WSIs to select high-quality, unique, and non-redundant features.
- The algorithm creates a collage of representative patches from the WSI.
Main Results:
- SPLICE demonstrated improved accuracy in search and match applications.
- Achieved reduced computation time and storage requirements compared to existing methods.
- Reduced storage requirements for tissue image representation by 50%.
Conclusions:
- SPLICE offers an efficient method for representing histopathology WSIs.
- The algorithm's efficiency enables broader application of computational pathology tools.
- SPLICE facilitates the accelerated adoption of digital pathology.
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