Related Experiment Video
Updated: Jun 19, 2025

Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
Published on: January 16, 2019
Insights into phenotypic variability caused by GARS1 pathogenic variants
Jesús Jiménez-Jiménez1,2, Irene Navarrete3, Inmaculada Azorín2,4
1Neuromuscular Diseases Unit, Department of Neurology, Hospital Universitari i Politècnic La Fe, Valencia, Spain.
Pathogenic variants in the GARS1 gene can cause distal hereditary motor neuropathy (dHMN) with "split hand" and sensory issues, even with normal nerve conduction studies. This highlights potential sensory neuron dysfunction affecting nerve endings.
Area of Science:
- Neurology
- Genetics
- Molecular Biology
Background:
- Pathogenic variants in the glycyl-tRNA synthetase 1 (GARS1) gene are linked to several neuromuscular disorders.
- These include Charcot-Marie-Tooth disease type 2D, distal hereditary motor neuropathy (dHMN) type V, and infantile spinal muscular atrophy.
Purpose of the Study:
- To investigate the clinical spectrum of GARS1 variants, specifically the c.794C>T (p.Ser265Phe) missense variant.
- To characterize the phenotype associated with this GARS1 variant, including neurological, electrophysiological, and histological findings.
Main Methods:
- A cross-sectional, retrospective study of 12 patients with the GARS1 c.794C>T variant.
- Review of clinical data, nerve conduction studies, MRI, and intraepidermal nerve fiber density in skin biopsies.
Main Results:
- Onset at a mean age of 9.5 years, with intrinsic hand muscles affected early.
- Predominant distal muscle weakness, particularly in the thenar complex and first dorsal interosseous.
- Electrophysiology confirmed exclusively motor axonal neuropathy; MRI showed leg muscle atrophy and fatty infiltration.
- Six patients had a "split hand" index, and nine showed reduced intraepidermal nerve fiber density.
Conclusions:
- GARS1 variants can manifest as dHMN with "split hand" and sensory disturbances.
- Sensory symptoms may occur despite normal sensory nerve conduction studies.
- This suggests dorsal root ganglion sensory neuron dysfunction impacting dermal nerve endings.
Related Concept Videos
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Single Nucleotide Polymorphisms-SNPs
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Genetic Screens
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which...
Incomplete Dominance
Pleiotropy

