Related Experiment Video
Updated: Jun 19, 2025

High-speed Video Microscopy Analysis for First-line Diagnosis of Primary Ciliary Dyskinesia
Published on: January 19, 2022
Primary Ciliary Dyskinesia Associated Disease-Causing Variants in CCDC39 and CCDC40 Cause Axonemal Absence of Inner
Alina Wilken1, Inga Marlena Höben1, Alexander Wolter2
1Department of General Pediatrics, University Hospital Muenster, 48149 Muenster, Germany.
Insights
Genetic variants in CCDC39 and CCDC40 cause primary ciliary dyskinesia (PCD) by disrupting the ciliary axonemal ruler. This study reveals the absence of key inner dynein arm (IDA) proteins in respiratory cilia, impacting diagnostics.
Area of Science:
- Cell Biology
- Genetics
- Respiratory Medicine
Background:
- Primary ciliary dyskinesia (PCD) is a hereditary respiratory disorder.
- Bi-allelic variants in CCDC39 and CCDC40 genes cause PCD by affecting the ciliary axonemal molecular ruler.
- Defects lead to abnormal ciliary beating, respiratory infections, and axonemal disorganization.
Purpose of the Study:
- To molecularly characterize defects in the 96 nm axonemal ruler caused by CCDC39 and CCDC40 variants.
- To analyze the impact of these variants on other axonemal components.
- To improve diagnostics for axonemal ruler defects in PCD.
Main Methods:
- Next-generation sequencing to identify individuals with CCDC39/CCDC40 variants.
- Immunofluorescence analysis of respiratory ciliary axonemes.
- Molecular characterization of protein assembly defects.
Main Results:
- Identified 51 individuals with disease-causing CCDC39/CCDC40 variants.
- Demonstrated conspicuous absence of IDA heavy chains DNAH1, DNAH6, and DNAH7 in respiratory cilia.
- Showed that centrin2 (CETN2)-containing IDAs are also affected.
Conclusions:
- CCDC39 and CCDC40 are crucial for the assembly and function of inner dynein arms (IDAs) in human respiratory cilia.
- The study identifies IDA defects as a key molecular consequence of CCDC39/CCDC40 variants.
- Findings enhance the diagnostics of axonemal ruler defects by characterizing associated IDA abnormalities.
Abstract:
Disease-causing bi-allelic DNA variants in CCDC39 and CCDC40 are frequent causes of the hereditary disorder of primary ciliary dyskinesia (PCD). The encoded proteins form a molecular ruler complex, crucial for maintaining the 96 nm repeat units along the ciliary axonemes. Defects of those proteins cause a stiff, rapid, and flickery ciliary beating pattern, recurrent respiratory infections, axonemal disorganization, and abnormal assembly of GAS8, CCDC39, and DNALI1. We performed molecular characterization of the defects in the 96 nm axonemal ruler due to disease-causing variants in CCDC39 and CCDC40 and analyzed the effect on additional axonemal components. We identified a cohort of 51 individuals with disease-causing variants in CCDC39 and CCDC40 via next-generation sequencing techniques and demonstrated that the IDA heavy chains DNAH1, DNAH6, and DNAH7 are conspicuously absent within the respiratory ciliary axonemes by immunofluorescence analyses. Hence, we show for the first time that the centrin2 (CETN2) containing IDAs are also affected. These findings underscore the crucial role of CCDC39 and CCDC40 in the assembly and function of IDAs in human respiratory cilia. Thus, our data improve the diagnostics of axonemal ruler defects by further characterizing the associated molecular IDA defects.
Related Concept Videos
Mechanism of Ciliary Motion
The cilia are made up of microtubules in a 9+2 arrangement, with nine microtubule doublet ring bundles, surrounding a pair of central singlet microtubule bundles. The doublet microtubule bundles are...
Microtubule Associated Motor Proteins
Anaphase Promoting Complex
Cohesins
Cohesin complexes in Meiotic Division
Meiosis involves two distinct rounds of chromosomal segregation and cell divisions— Meiosis I followed by Meiosis II – producing four daughter cells. Meiosis I includes the separation of...
Microtubules in Cell Motility
Microtubules in Signaling

