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On Entropic Learning from Noisy Time Series in the Small Data Regime.

Davide Bassetti1, Lukáš Pospíšil2, Illia Horenko1

  • 1Faculty of Mathematics, RPTU Kaiserslautern-Landau, Gottlieb-Daimler-Str. 48, 67663 Kaiserslautern, Germany.

Entropy (Basel, Switzerland)
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Summary

We introduce Entropic Sparse Probabilistic Approximation with Markov regularization (eSPA-Markov), a new method for classifying noisy, time-ordered data. This technique efficiently identifies patterns and regime switches in complex, high-dimensional time series, including biological sequence data.

Keywords:
Markov processesentropic AImachine learningsmall datatime series

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Area of Science:

  • Computational statistics
  • Machine learning
  • Time series analysis

Background:

  • Supervised classification of time-ordered data is challenging, especially with noise and high dimensionality.
  • Existing methods struggle with non-stationary data where signal variance is low compared to noise variance.

Purpose of the Study:

  • To present a novel methodology, Entropic Sparse Probabilistic Approximation with Markov regularization (eSPA-Markov), for supervised classification of time-ordered noisy data.
  • To enable simultaneous learning of segmentation, feature discretization, and classification rules.
  • To provide a computationally scalable solution for analyzing high-dimensional, non-stationary, and noisy time series.

Main Methods:

  • eSPA-Markov extends entropic learning methodologies.
  • It incorporates Markov regularization for improved pattern recognition.
  • A one-shot numerical learning algorithm with linear scaling in dimension is proposed.

Main Results:

  • The study proves the conditions for the existence and uniqueness of the learning problem solution.
  • eSPA-Markov demonstrates efficient identification of persistent regimes and regime switches.
  • Performance is validated against state-of-the-art methods on toy problems and real-world biological data (DNA/RNA Nanopore sequencing).

Conclusions:

  • eSPA-Markov offers a robust and scalable approach for analyzing complex time series data.
  • The methodology is particularly effective for high-dimensional, noisy, and non-stationary datasets.
  • eSPA-Markov shows promise for applications in bioinformatics and other fields dealing with similar data challenges.