Non-Hereditary Obesity Type Networks and New Drug Targets: An In Silico Approach

Styliani A Geronikolou1,2, Athanasia Pavlopoulou3,4, Merve Uça Apaydin3,4

  • 1Clinical, Translational Research and Experimental Surgery Centre, Biomedical Research Foundation of the Academy of Athens, 4, Soranou Ephessiou Str., 11527 Athens, Greece.

Insights

This study maps gene networks in non-hereditary obesity, revealing stress and inflammation pathways. It identifies potential therapeutic targets and natural compounds for obesity treatment.

Area of Science:

  • Genetics and Systems Biology
  • Metabolic Disorders
  • Chronobiology

Background:

  • Obesity is a chronic, preventable disease with high societal costs due to comorbidities.
  • Understanding the pathogenesis of non-hereditary obesity is crucial for identifying therapeutic targets.
  • Biological clock genes play a role in energy balance and metabolic regulation.

Purpose of the Study:

  • To reconstruct interactomes of non-hereditary obesity to elucidate pathogenesis.
  • To identify potential therapeutic targets for obesity.
  • To discover natural compounds targeting obesity and circadian clock-associated proteins.

Main Methods:

  • Extracted obesity and biological-clock-related genes from PubMed, GeneCards, and OMIM.
  • Investigated gene/protein interactions using STRING v11.0 with a high confidence score (>0.7).
  • Applied virtual screening to identify natural compounds targeting relevant proteins.

Main Results:

  • Developed two interactomes: stress-induced (85 genes) and inflammation-induced (93 genes) obesidomes.
  • Identified 15 common genes between the two interactomes, including key metabolic and hormonal regulators (e.g., LEP, INS, MC4R).
  • Phelligridin E identified as a potential FOX1-DBD interaction blocker.

Conclusions:

  • Molecular networks provide insights into the integrated regulation of energy balance and obesity pathogenesis.
  • Findings may link chronopharmacology with natural products for novel obesity treatments.
  • Identified interactomes and compounds offer potential avenues for therapeutic intervention.

Related Concept Videos

Protein Networks02:26

Protein Networks

An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
3.9K
Transducer Mechanism: Enzyme-Linked Receptors01:27

Transducer Mechanism: Enzyme-Linked Receptors

Enzyme-linked receptors are cell-surface receptors acting as an enzyme or associating with an enzyme intracellularly. They make excellent drug targets. Drugs can bind to the extracellular ligand-binding domain or directly affect their enzymatic domain and alter their activity.
Major types that are helpful drug targets include:
2.4K
Protein-protein Interfaces02:04

Protein-protein Interfaces

Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
12.5K
Drug Discovery: Overview01:26

Drug Discovery: Overview

Drug discovery is a multifaceted process involving extensive screening, testing, and optimization of lead compounds to identify potential new drugs for therapeutic use. It combines several approaches, including screening large numbers of natural products, chemical modification of known active molecules, identification of new drug targets, and rational design based on biological mechanisms and drug-receptor structure. These approaches are carried out in both academic research laboratories and...
7.7K
Transducer Mechanism: Nuclear Receptors01:31

Transducer Mechanism: Nuclear Receptors

Nuclear receptors, or NRs, are unique transcription factors that regulate gene transcription and affect the cellular pathways involved in reproduction, development, or metabolism. Their ability to be stimulated by small lipophilic ligands and control vital cellular processes makes them ideal drug targets. Nearly 10-15% of currently prescribed drugs target these receptors.
About 48 different soluble family members of nuclear receptors are identified that can be divided into two main classes:
1.3K
Obesity01:24

Obesity

The Body Mass Index (BMI) is a numerical value derived from a person's weight and height, used to categorize individuals into weight ranges. It is calculated using the formula: weight in kilograms divided by height in meters squared. Obesity is a health condition characterized by excessive accumulation of adipose tissue that poses health risks, often diagnosed with a BMI ≥ 30. This excess fat storage occurs when surplus dietary calories are converted into triglycerides and stored in...
418