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Identifying and Forecasting Importation and Asymptomatic Spreaders of Multi-drug Resistant Organisms in Hospital
Jiaming Cui1,2, Jack Heavey3, Eili Klein4,5,6
1College of Computing, Georgia Institute of Technology, Atlanta, GA 30332, US.
Abstract:
Healthcare-associated infections (HAIs) from multi-drug resistant organisms (MDROs) pose a significant challenge for healthcare systems. Patients can arrive at hospitals already infected ("importation") or acquire infections during their stay ("nosocomial infection"). Many cases, often asymptomatic, complicate rapid identification due to testing limitations and delays. Although recent advancements in mathematical modeling and machine learning have aimed to identify at-risk patients, these methods face challenges: transmission models often overlook valuable electronic health record (EHR) data, while machine learning approaches typically lack mechanistic insights into underlying processes. To address these issues, we propose NeurABM, a novel framework that integrates neural networks and agent-based models (ABM) to leverage the strengths of both methods. NeurABM simultaneously learns a neural network for patient-level importation predictions and an ABM for infection identification. Our findings show that NeurABM significantly outperforms existing methods, marking a breakthrough in accurately identifying importation cases and forecasting future nosocomial infections in clinical practice.
Insights
This study introduces NeurABM, a new framework combining neural networks and agent-based models to improve the detection of healthcare-associated infections (HAIs) from multi-drug resistant organisms (MDROs). NeurABM accurately predicts patient importation and forecasts nosocomial infections.
Area of Science:
- Computational epidemiology
- Infectious disease modeling
- Health informatics
Background:
- Healthcare-associated infections (HAIs) caused by multi-drug resistant organisms (MDROs) present a major healthcare challenge.
- Distinguishing between imported and nosocomial infections is difficult due to asymptomatic cases and diagnostic limitations.
- Existing predictive models often fail to integrate electronic health record (EHR) data or lack mechanistic understanding.
Purpose of the Study:
- To develop a novel framework, NeurABM, integrating neural networks and agent-based models (ABM).
- To leverage EHR data and mechanistic insights for improved prediction of infection importation and nosocomial spread.
- To enhance the accuracy of identifying patients at risk for MDRO infections.
Main Methods:
- Developed NeurABM, a hybrid framework combining neural networks and agent-based modeling.
- Utilized neural networks for patient-level importation prediction.
- Employed agent-based models for simulating infection transmission and identification.
Main Results:
- NeurABM significantly outperforms existing methods in identifying importation cases.
- The framework demonstrates superior accuracy in forecasting future nosocomial infections.
- Successfully integrated EHR data with mechanistic modeling for enhanced prediction.
Conclusions:
- NeurABM represents a breakthrough in accurately identifying and forecasting healthcare-associated infections.
- The integrated approach offers a more robust solution compared to standalone modeling or machine learning techniques.
- This framework has the potential to significantly improve clinical practice for infection control.
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