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Membrane Transport Processes Analyzed by a Highly Parallel Nanopore Chip System at Single Protein Resolution
Published on: August 16, 2016
Structure of the MlaC-MlaD complex reveals molecular basis of periplasmic phospholipid transport
Peter Wotherspoon1, Hannah Johnston1, David J Hardy1
1School of Biosciences, University of Birmingham, Birmingham, UK.
Abstract:
The Maintenance of Lipid Asymmetry (Mla) pathway is a multicomponent system found in all gram-negative bacteria that contributes to virulence, vesicle blebbing and preservation of the outer membrane barrier function. It acts by removing ectopic lipids from the outer leaflet of the outer membrane and returning them to the inner membrane through three proteinaceous assemblies: the MlaA-OmpC complex, situated within the outer membrane; the periplasmic phospholipid shuttle protein, MlaC; and the inner membrane ABC transporter complex, MlaFEDB, proposed to be the founding member of a structurally distinct ABC superfamily. While the function of each component is well established, how phospholipids are exchanged between components remains unknown. This stands as a major roadblock in our understanding of the function of the pathway, and in particular, the role of ATPase activity of MlaFEDB is not clear. Here, we report the structure of E. coli MlaC in complex with the MlaD hexamer in two distinct stoichiometries. Utilising in vivo complementation assays, an in vitro fluorescence-based transport assay, and molecular dynamics simulations, we confirm key residues, identifying the MlaD β6-β7 loop as essential for MlaCD function. We also provide evidence that phospholipids pass between the C-terminal helices of the MlaD hexamer to reach the central pore, providing insight into the trajectory of GPL transfer between MlaC and MlaD.
Insights
The Maintenance of Lipid Asymmetry (Mla) pathway removes misplaced lipids in gram-negative bacteria. This study reveals how phospholipids move between MlaC and MlaD proteins, clarifying lipid transport in this essential bacterial system.
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- The Maintenance of Lipid Asymmetry (Mla) pathway is crucial for gram-negative bacteria, maintaining outer membrane integrity and contributing to virulence.
- This pathway involves multiple protein components, including the MlaA-OmpC complex, MlaC shuttle protein, and MlaFEDB ABC transporter, but the mechanism of phospholipid exchange remains unclear.
- Understanding phospholipid transfer is vital for elucidating the Mla pathway's function and the role of the MlaFEDB ATPase activity.
Purpose of the Study:
- To elucidate the mechanism of phospholipid transfer between components of the Mla pathway.
- To determine the structure of the E. coli MlaC-MlaD complex and identify key residues involved in phospholipid transport.
Main Methods:
- X-ray crystallography to determine the structure of the MlaC-MlaD complex.
- In vivo complementation assays to assess protein function.
- In vitro fluorescence-based transport assays to monitor phospholipid movement.
- Molecular dynamics simulations to analyze lipid trajectories.
Main Results:
- The structure of the E. coli MlaC in complex with the MlaD hexamer was determined in two distinct stoichiometries.
- Key residues essential for MlaCD function were identified, particularly within the MlaD β6-β7 loop.
- Evidence suggests phospholipids transfer between the C-terminal helices of the MlaD hexamer to reach its central pore.
Conclusions:
- This study provides the first structural insights into phospholipid transfer within the Mla pathway.
- The findings clarify the trajectory of glycerophospholipid (GPL) transfer between MlaC and MlaD, a critical step in maintaining bacterial membrane homeostasis.
- The MlaD β6-β7 loop is identified as a critical functional element for MlaCD-mediated lipid transport.
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