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Characterization of the SUF FeS cluster synthesis machinery in the amitochondriate eukaryote Monocercomonoides exilis
Priscila Peña-Diaz1, Joseph J Braymer2, Vojtěch Vacek1
1Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Průmyslová 595, 25250 Vestec, Czech Republic.
Abstract:
Monocercomonoides exilis is the first known amitochondriate eukaryote. Loss of mitochondria in M. exilis ocurred after the replacement of the essential mitochondrial iron-sulfur cluster (ISC) assembly machinery by a unique, bacteria-derived, cytosolic SUF system. It has been hypothesized that the MeSuf pathway, in cooperation with proteins of the cytosolic iron-sulfur protein assembly (CIA) system, is responsible for the biogenesis of FeS clusters in M. exilis, yet biochemical evidence is pending. Here, we address the M. exilis MeSuf system and show that SUF genes, individually or in tandem, support the loading of iron-sulfur (FeS) clusters into the reporter protein IscR in Escherichia coli. The Suf proteins MeSufB, MeSufC, and MeSufDSU interact in vivo with one another and with Suf proteins of E. coli. In vitro, the M. exilis Suf proteins form large complexes of varying composition and hence may function as a dynamic biosynthetic system in the protist. The putative FeS cluster scaffold MeSufB-MeSufC (MeSufBC) forms multiple oligomeric complexes, some of which bind FeS clusters and form selectively only in the presence of adenosine nucleotides. The multi-domain fusion protein MeSufDSU binds a PLP cofactor and can form higher-order complexes with MeSufB and MeSufC. Our work demonstrates the biochemical property of M. exilis Suf proteins to act as a functional FeS cluster assembly system and provides insights into the molecular mechanism of this unique eukaryotic SUF system.
Insights
Monocercomonoides exilis utilizes a unique bacterial SUF system for iron-sulfur (FeS) cluster biogenesis, replacing its lost mitochondria. This study confirms the functional FeS cluster assembly of these eukaryotic SUF proteins.
Area of Science:
- Eukaryotic molecular biology
- Biochemistry of iron-sulfur cluster assembly
Background:
- Monocercomonoides exilis is the first known amitochondriate eukaryote.
- Mitochondrial iron-sulfur cluster (ISC) machinery was replaced by a bacterial SUF system in M. exilis.
- The precise mechanism of this eukaryotic SUF system for FeS cluster biogenesis was previously uncharacterized.
Purpose of the Study:
- To biochemically characterize the Monocercomonoides exilis SUF system for iron-sulfur (FeS) cluster assembly.
- To investigate the in vivo and in vitro interactions and functions of M. exilis SUF proteins.
- To provide insights into the molecular mechanism of this unique eukaryotic FeS cluster biogenesis pathway.
Main Methods:
- Expressed M. exilis SUF genes in Escherichia coli to assess FeS cluster loading into the IscR reporter protein.
- Investigated in vivo interactions between M. exilis Suf proteins and E. coli Suf proteins using co-immunoprecipitation.
- Characterized the in vitro assembly, composition, and FeS binding properties of M. exilis Suf protein complexes.
Main Results:
- M. exilis SUF genes functionally support FeS cluster loading in E. coli.
- M. exilis Suf proteins (MeSufB, MeSufC, MeSufDSU) interact with each other and with E. coli Suf proteins in vivo.
- In vitro, M. exilis Suf proteins form dynamic, oligomeric complexes (e.g., MeSufBC) that bind FeS clusters, with assembly influenced by adenosine nucleotides and MeSufDSU.
Conclusions:
- The M. exilis SUF proteins possess biochemical properties enabling them to function as a complete FeS cluster assembly system.
- This study elucidates the molecular mechanism of a unique eukaryotic SUF system essential for life in an amitochondriate organism.
- The findings highlight the adaptability of cellular machinery through horizontal gene transfer and subsequent functional integration.
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