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Published on: July 31, 2019
Gut microbiota causally affects drug-induced liver injury via plasma metabolites: a Mendelian randomization study
Haoshuang Fu1, Shuang Zhao2, Shuying Song1
1Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Background:
The gut microbiota and plasma metabolites play important roles in the progression of drug-induced liver injury (DILI). We investigated the causal associations between the gut microbiota, plasma metabolome, and DILI.
Methods:
The summary data for gut microbiota (n = 18,340), plasma metabolome (n = 8,299), and DILI (n = 366,838) were obtained from the large genome-wide association studies. A two-sample Mendelian randomization was performed to explore the associations between the gut microbiota, plasma metabolome, and DILI. Additionally, a two-step Mendelian randomization was performed to explore the potential metabolites.
Results:
Five taxa were causally associated with DILI, including Oscillospira [odds ratio (OR) = 2.257, 95% confidence interval (CI) = 1.110-4.590], Blautia (OR = 2.311, 95% CI = 1.010-5.288), Roseburia (OR = 2.869, 95% CI = 1.429-5.761), Fusicatenibacter (OR = 1.995, 95% CI = 1.024-3.890), and Prevotella 7 (OR = 1.549, 95% CI = 1.065-2.253). Moreover, 53 metabolites were causally associated with DILI. After mediation analysis, four taxa were found to affect DILI through five mediation metabolites. N6-carbamoylthreonyladenosine mediated the effect of Blautia on DILI. Acetylcarnitine mediated the effect of Fusicatenibacter on DILI. In addition, 4-cholesten-3-one mediated the effect of Prevotella 7 on DILI. Furthermore, 5,6-dihydrothymine levels and the salicylate-to-citrate ratio mediated the effect of Oscillospira on DILI.
Conclusion:
We found that the gut microbiota could affect DILI through plasma metabolites, which could serve as potential biomarkers for risk stratification and elucidate underlying mechanisms for further investigation of DILI.
Insights
Gut microbiota and plasma metabolites causally influence drug-induced liver injury (DILI). Specific gut bacteria like Blautia and Oscillospira impact DILI through mediating metabolites, offering potential biomarkers for risk stratification.
Area of Science:
- Microbiology
- Metabolomics
- Hepatology
Background:
- Drug-induced liver injury (DILI) is a significant clinical concern.
- The gut microbiota and plasma metabolome are implicated in DILI pathogenesis.
- Understanding their interplay is crucial for DILI management.
Purpose of the Study:
- To investigate the causal relationships between gut microbiota, plasma metabolites, and DILI.
- To identify specific microbial taxa and metabolites associated with DILI risk.
- To explore the mediating role of metabolites in the gut microbiota-DILI axis.
Main Methods:
- Utilized large-scale genome-wide association study summary data for gut microbiota (n=18,340), plasma metabolome (n=8,299), and DILI (n=366,838).
- Employed two-sample Mendelian randomization to assess causal associations.
- Conducted two-step Mendelian randomization and mediation analysis to identify mediating metabolites.
Main Results:
- Five gut microbial taxa, including *Oscillospira* and *Blautia*, showed causal associations with DILI.
- Fifty-three plasma metabolites were found to be causally linked to DILI.
- Four taxa influenced DILI via five mediating metabolites, such as N6-carbamoylthreonyladenosine and acetylcarnitine.
Conclusions:
- The gut microbiota exerts influence on DILI through alterations in plasma metabolites.
- Identified microbial taxa and mediating metabolites may serve as potential biomarkers for DILI risk stratification.
- These findings provide insights into the mechanisms underlying DILI.
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