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Published on: January 31, 2018
GLI1 confers resistance to PARP inhibitors by activating the DNA damage repair pathway
Hiroshi Ikeuchi1,2, Yusuke Matsuno3, Rika Kusumoto-Matsuo3
1Division of Cellular Signaling, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan.
Abstract:
Identifying the mechanisms of action of anticancer drugs is an important step in the development of new drugs. In this study, we established a comprehensive screening platform consisting of 68 oncogenes (MANO panel), encompassing 243 genetic variants, to identify predictive markers for drug efficacy. Validation was performed using drugs that targeted EGFR, BRAF, and MAP2K1, which confirmed the utility of this functional screening panel. Screening of a BRCA2-knockout DLD1 cell line (DLD1-KO) revealed that cells expressing SMO and GLI1 were resistant to olaparib. Gene set enrichment analysis identified genes associated with DNA damage repair that were enriched in cells overexpressing SMO and GLI1. The expression of genes associated with homologous recombination repair (HR), such as the FANC family and BRCA1/2, was significantly upregulated by GLI1 expression, which is indicative of PARP inhibitor resistance. Although not all representative genes of the nucleotide excision repair (NER) pathway were upregulated, NER activity was enhanced by GLI1. The GLI1 inhibitor was effective against DLD1-KO cells overexpressing GLI1 both in vitro and in vivo. Furthermore, the combination therapy of olaparib and GLI1 inhibitor exhibited a synergistic effect on DLD1-KO, suggesting the possible clinical application of GLI1 inhibitor targeting cancer with defective DNA damage repair. This platform enables the identification of biomarkers associated with drug sensitivity, and is a useful tool for drug development.
Insights
A new screening platform identified SMO and GLI1 as markers for resistance to DNA damage repair drugs like olaparib. Inhibiting GLI1 shows promise for treating cancers with defective DNA repair mechanisms.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Identifying anticancer drug mechanisms is crucial for new drug development.
- A comprehensive screening platform can identify predictive markers for drug efficacy.
Purpose of the Study:
- To establish and validate a comprehensive oncogene screening platform (MANO panel) for identifying drug efficacy markers.
- To investigate the role of SMO and GLI1 in resistance to DNA damage repair inhibitors.
Main Methods:
- Developed a screening platform with 68 oncogenes and 243 genetic variants.
- Validated the platform using EGFR, BRAF, and MAP2K1 targeted drugs.
- Screened a BRCA2-knockout DLD1 cell line (DLD1-KO) for drug resistance markers.
- Performed gene set enrichment analysis and assessed DNA damage repair pathways (HR and NER).
- Evaluated the efficacy of a GLI1 inhibitor and combination therapy in vitro and in vivo.
Main Results:
- The MANO panel successfully validated predictive markers for drug efficacy.
- SMO and GLI1 expression conferred resistance to olaparib in DLD1-KO cells.
- GLI1 overexpression upregulated homologous recombination (HR) repair genes and enhanced nucleotide excision repair (NER) activity.
- GLI1 inhibition demonstrated efficacy against GLI1-overexpressing DLD1-KO cells.
- Combination therapy of olaparib and GLI1 inhibitor showed synergistic effects.
Conclusions:
- The developed screening platform is a valuable tool for identifying drug sensitivity biomarkers and aiding drug development.
- GLI1 is implicated in resistance to DNA damage repair inhibitors through modulation of DNA repair pathways.
- GLI1 inhibition represents a potential therapeutic strategy for cancers with defective DNA damage repair, possibly in combination with PARP inhibitors.
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