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Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
Published on: May 17, 2019
Biomarker profiling and integrating heterogeneous models for enhanced multi-grade breast cancer prognostication
Rakesh Chandra Joshi1, Pallavi Srivastava2, Rashmi Mishra2
1Amity Centre for Artificial Intelligence, Amity University, Noida, Uttar Pradesh, India; Centre for Advanced Studies, Dr. A.P.J. Abdul Kalam Technical University, Lucknow, Uttar Pradesh, India.
This study introduces an AI model for early breast cancer detection and grading using biomarkers (beta-human chorionic gonadotropin, PD-L1, alpha-fetoprotein) and age. The model achieves high accuracy, improving diagnosis and treatment, especially in resource-limited areas.
Area of Science:
- Oncology
- Artificial Intelligence
- Biomarker Research
Background:
- Breast cancer is a leading cause of mortality in women globally.
- Limited awareness and screening resources hinder early diagnosis and effective treatment.
- Accurate, early detection is critical for improving survival rates.
Purpose of the Study:
- To develop an AI-based model for predicting breast cancer and its histopathological grades.
- To integrate multiple biomarkers and subject age for enhanced diagnostic accuracy and prognostication.
- To advance breast cancer screening and personalized treatment strategies.
Main Methods:
- An ensemble machine learning framework integrating beta-human chorionic gonadotropin (β-hCG), Programmed Cell Death Ligand 1 (PD-L1), and alpha-fetoprotein (AFP) with subject age.
- Particle Swarm Optimization (PSO) for hyperparameter tuning and minority oversampling to prevent overfitting.
- Model performance validated using five-fold cross-validation.
Main Results:
- The AI model achieved 97.93% accuracy and 98.06% F1-score on test data.
- Demonstrated superior performance compared to state-of-the-art methods across diverse age groups.
- Highlighted robustness and generalizability of the proposed framework.
Conclusions:
- The study presents a significant advancement in breast cancer screening by integrating multiple biomarkers for accurate tumor grading.
- The AI framework offers potential to reduce mortality rates, especially in resource-limited settings.
- Enables improved early intervention and personalized treatment strategies for breast cancer patients.
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