Identification of chemoresistance targets in doxorubicin-resistant lung adenocarcinoma cells using LC-MS/MS-based

Nuzhat Bano1,2, K M Kainat1,2, Mohammad Imran Ansari1,2

  • 1Food Toxicology Group, Food, Drug & Chemical, Environment, and Systems Toxicology (FEST) Division, CSIR-Indian Institute of Toxicology Research, Lucknow, Uttar Pradesh, India.

Insights

Identifying chemoresistance targets is crucial for treating cancers that become resistant to chemotherapy. This study used proteomics to find proteins and pathways involved in doxorubicin resistance in lung cancer cells, revealing potential therapeutic targets.

Area of Science:

  • Proteomics
  • Cancer Biology
  • Molecular Oncology

Background:

  • Acquired chemoresistance is a major clinical hurdle, leading to treatment failure in many cancers.
  • Identifying novel therapeutic targets is essential for overcoming drug resistance and improving patient outcomes.

Purpose of the Study:

  • To identify potential therapeutic targets and signaling pathways associated with acquired chemoresistance.
  • To investigate the molecular mechanisms underlying doxorubicin (DOX) resistance in lung adenocarcinoma cells.

Main Methods:

  • Label-free liquid chromatography-tandem mass spectrometry (LC-MS/MS) quantitative proteomics was used.
  • Differential protein expression analysis was performed on A549DR cells (doxorubicin-resistant) versus A549 cells (parental).
  • Bioinformatic analyses including KEGG pathway, Gene Ontology (GO), and STRING for protein-protein interaction (PPI) network analysis were conducted.

Main Results:

  • Proteomics identified 146 upregulated and 129 downregulated proteins in A549DR cells.
  • Upregulated pathways included metabolic pathways, cellular senescence, cell cycle, and p53 signaling.
  • Downregulated pathways involved spliceosome, nucleotide metabolism, DNA replication, nucleotide excision repair, and nuclear-cytoplasmic transport.
  • Key upregulated proteins with PPIs included CDK1, AKT2, SRC, STAT1, HDAC1, FDXR, FDX1, NPC1, ALDH2, GPx1, CDK4, and B2M.

Conclusions:

  • The study identified several proteins and pathways implicated in acquired doxorubicin resistance.
  • These proteins, including CDK1, AKT2, and SRC, represent potential therapeutic targets for overcoming chemoresistance.
  • Further research into these targets could lead to novel strategies for managing drug-resistant lung adenocarcinoma.