Molecular and phenotypic characterization of Streptococcus pneumoniae isolates in a Japanese tertiary care hospital

Takumi Nakao1, Kosuke Kosai1, Norihiko Akamatsu2

  • 1Department of Laboratory Medicine, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, Japan.

Insights

High rates of macrolide resistance were found in Japanese pneumococcal isolates, with specific serotypes and sequence types linked to resistance genes. Novel antibiotics solithromycin and lascufloxacin demonstrated potent in vitro activity against these resistant strains.

Area of Science:

  • Microbiology
  • Infectious Diseases
  • Antimicrobial Resistance

Background:

  • Streptococcus pneumoniae (pneumococcus) is a leading cause of bacterial infections worldwide.
  • Macrolide resistance in pneumococci is a growing public health concern, complicating treatment options.
  • Understanding the characteristics of local pneumococcal populations is crucial for effective antimicrobial stewardship.

Purpose of the Study:

  • To investigate the bacterial characteristics of pneumococcal isolates from a Japanese tertiary care hospital.
  • To analyze antimicrobial susceptibility, macrolide resistance gene prevalence, serotypes, and sequence types.
  • To evaluate the in vitro activity of novel antibiotics against these isolates.

Main Methods:

  • Analysis of 73 pneumococcal isolates from patients aged ≥15 years (2011-2020) at Nagasaki University Hospital.
  • Antimicrobial susceptibility testing, including minimal inhibitory concentration (MIC) determination.
  • Detection of macrolide resistance genes (mefA, ermB) and characterization of pneumococcal serotypes and sequence types (STs).

Main Results:

  • 86.3% of isolates exhibited macrolide resistance; 28.8% harbored mefA, 46.6% ermB, and 11.0% both.
  • Isolates with ermB showed high-level macrolide resistance (MIC > 16 µg/mL).
  • Serotype 19A was most prevalent; serotypes 11A, 19A, 22F, and 23B, along with specific STs, were significantly correlated with macrolide resistance genes.
  • Solithromycin and lascufloxacin demonstrated potent in vitro activity against all isolates, irrespective of resistance gene presence.

Conclusions:

  • A high prevalence of macrolide resistance exists in pneumococcal isolates from Nagasaki University Hospital.
  • Specific serotypes and STs are associated with macrolide resistance mechanisms.
  • Solithromycin and lascufloxacin represent promising therapeutic options against drug-resistant pneumococci.