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The Effect of Replication Protein A Inhibition and Post-Translational Modification on ATR Kinase Signaling
Matthew R Jordan1, Greg G Oakley2, Lindsey D Mayo1
1Indiana University School of Medicine.
Abstract:
The ATR kinase responds to elevated levels of single-stranded DNA (ssDNA) to activate the G2/M checkpoint, regulate origin utilization, preserve fork stability, and allow DNA repair towards ensuring genome integrity. The intrinsic replication stress in cancer cells makes this pathway an attractive therapeutic target. The ssDNA that drives ATR signaling is sensed by the ssDNA-binding protein replication protein A (RPA), which acts as a platform for ATRIP recruitment and subsequent ATR activation by TopBP1. We have developed chemical RPA inhibitors (RPAi) that block RPA-ssDNA interactions, termed RPA-DBi, and RPA protein-protein interactions, termed RPA-PPIi; both activities are required for ATR activation. Here, we employ a biochemically reconstituted ATR kinase signaling pathway and demonstrate that both RPA-DBi and RPA-PPIi abrogate ATR-dependent phosphorylation of downstream target proteins. We demonstrate that RPA post-translational modifications (PTMs) impact ATR kinase activation but do not alter sensitivity to RPAi. Specifically, phosphorylation of RPA32 and TopBP1 stimulate, while RPA70 acetylation has no effect on ATR phosphorylation of target proteins. Collectively, this work reveals the RPAi mechanism of action to inhibit ATR signaling that can be regulated by RPA PTMs and offers insight into the anti-cancer activity of ATR pathway targeted cancer therapeutics.
Insights
New chemical inhibitors targeting replication protein A (RPA) block ATR kinase signaling, crucial for cancer cell survival. These RPA inhibitors offer a promising strategy for developing novel anti-cancer therapeutics by disrupting DNA damage response pathways.
Area of Science:
- Molecular Biology
- Biochemistry
- Cancer Therapeutics
Background:
- The ATR kinase pathway is vital for maintaining genome integrity by responding to DNA damage.
- Replication protein A (RPA) is essential for sensing single-stranded DNA and activating ATR signaling.
- ATR pathway dysregulation is a hallmark of cancer, making it a therapeutic target.
Purpose of the Study:
- To elucidate the mechanism of action of novel chemical RPA inhibitors (RPAi).
- To investigate the role of RPA post-translational modifications (PTMs) in ATR kinase activation and RPAi sensitivity.
- To provide insights into the anti-cancer potential of RPAi targeting the ATR pathway.
Main Methods:
- Biochemically reconstituted ATR kinase signaling pathway.
- Development and application of RPA-DNA binding inhibitors (RPA-DBi) and RPA protein-protein interaction inhibitors (RPA-PPIi).
- Analysis of RPA and TopBP1 post-translational modifications (PTMs) including phosphorylation and acetylation.
Main Results:
- Both RPA-DBi and RPA-PPIi effectively abrogate ATR-dependent phosphorylation of downstream targets.
- RPA32 phosphorylation and TopBP1 phosphorylation stimulate ATR kinase activation.
- RPA70 acetylation does not affect ATR kinase activation.
- RPA PTMs impact ATR signaling but do not alter sensitivity to RPA inhibitors.
Conclusions:
- Chemical RPA inhibitors effectively block ATR signaling by interfering with RPA function.
- RPA PTMs modulate ATR kinase activation, offering a layer of regulation.
- Understanding RPAi mechanisms and RPA PTMs is crucial for developing effective ATR-targeted cancer therapies.
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