Related Experiment Video
Updated: Jun 17, 2025

Tools to Study the Role of Architectural Protein HMGB1 in the Processing of Helix Distorting, Site-specific DNA Interstrand Crosslinks
Published on: November 10, 2016
The Arp2/3 inhibitory protein Arpin inhibits homology-directed DNA repair
Gleb Simanov1, Nathalie Rocques1, Stéphane Romero1
1Laboratory of Structural Biology of the Cell (BIOC), UMR7654 CNRS/Ecole polytechnique, Institut Polytechnique de Paris, Palaiseau, France.
Background Information:
Arpin, an Arp2/3 inhibitory protein, inhibits lamellipodial protrusions and cell migration. Arpin expression is lost in tumor cells of several cancer types.
Results:
Here we analyzed expression levels of Arpin and various markers using Reverse Phase Protein Array (RPPA) in human mammary carcinomas. We found that Arpin protein levels were correlated with those of several DNA damage response markers. Arpin-null cells display enhanced clustering of double stand breaks (DSBs) when cells are treated with a DNA damaging agent, in line with a previously described role of the Arp2/3 complex in promoting DSB clustering for homologous DNA repair (HDR) in the nucleus. Using a specific HDR assay, we further showed that Arpin depletion increased HDR efficiency two-fold through its ability to inactivate the Arp2/3 complex.
Conclusions:
Arpin regulates both cell migration in the cytosol and HDR in the nucleus.
Significance:
Loss of Arpin expression coordinates enhanced cell migration with up-regulated DNA repair, which is required when DNA damage is induced by active cell migration.
Insights
Arpin loss enhances cell migration and DNA repair. This protein regulates lamellipodial protrusions in the cytosol and homologous DNA repair (HDR) in the nucleus, impacting cancer progression.
Area of Science:
- Cell biology
- Cancer research
- Molecular genetics
Background:
- Arpin is an Arp2/3 inhibitory protein that suppresses lamellipodial protrusions and cell migration.
- Loss of Arpin expression is observed in several cancer types, suggesting a role in tumorigenesis.
Purpose of the Study:
- To investigate the role of Arpin in DNA damage response and repair.
- To explore the correlation between Arpin levels and DNA damage response markers in human mammary carcinomas.
Main Methods:
- Reverse Phase Protein Array (RPPA) analysis of Arpin and DNA damage response markers in human mammary carcinomas.
- Assessment of double-strand break (DSB) clustering in Arpin-null cells treated with DNA damaging agents.
- Utilizing a specific homologous DNA repair (HDR) assay to quantify repair efficiency upon Arpin depletion.
Main Results:
- Arpin protein levels positively correlated with several DNA damage response markers.
- Arpin-null cells exhibited enhanced DSB clustering following DNA damage treatment.
- Arpin depletion resulted in a two-fold increase in HDR efficiency, attributed to Arp2/3 complex inactivation.
Conclusions:
- Arpin plays a dual role, regulating cell migration in the cytosol and homologous DNA repair (HDR) in the nucleus.
- Loss of Arpin expression coordinates increased cell migration with heightened DNA repair capacity, potentially linked to DNA damage induced by cell motility.
Related Concept Videos
Restarting Stalled Replication Forks
DNA Damage can Stall the Cell Cycle
Homologous Recombination
Long-patch Base Excision Repair
piRNA - Piwi-interacting RNAs
Experimental RNAi

