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ComBatLS: A location- and scale-preserving method for multi-site image harmonization.

Margaret Gardner1,2, Russell T Shinohara3,4, Richard A I Bethlehem5

  • 1Brain-Gene-Development Lab, The Children's Hospital of Philadelphia and Penn Medicine, Philadelphia, PA, USA.

Biorxiv : the Preprint Server for Biology
|August 12, 2024
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Summary
This summary is machine-generated.

ComBatLS, a new harmonization method, accurately models neuroanatomy by preserving biological sex and age effects. This improves normative scores and reduces biases in large-scale neuroimaging data analysis.

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Area of Science:

  • Neuroimaging
  • Biostatistics
  • Computational Neuroscience

Background:

  • Massive datasets and harmonization methods are used for neuroanatomical normative models.
  • Current tools fail to preserve biological covariate effects (sex, age), causing errors in normative scores, especially with unequal site distributions.

Purpose of the Study:

  • Introduce ComBatLS, an extension of ComBat, to preserve biological variance in neuroanatomical features.
  • Evaluate ComBatLS's performance in replicating normative scores and reducing sex biases.
  • Assess ComBatLS's effectiveness in harmonizing large-scale, multi-study neuroimaging data.

Main Methods:

  • Developed ComBatLS, a novel extension of the ComBat harmonization algorithm.
  • Utilized UK Biobank data for validation, creating sex-imbalanced synthetic sites.
  • Applied ComBatLS to harmonize data from over 50 studies.

Main Results:

  • ComBatLS robustly replicates normative scores better than other ComBat methods in sex-imbalanced scenarios.
  • ComBatLS significantly reduces sex biases in normative scores compared to traditional methods.
  • ComBatLS successfully harmonizes large-scale consortium neuroimaging data.

Conclusions:

  • ComBatLS effectively preserves biological variance, improving the accuracy of neuroanatomical normative models.
  • This method enhances the reliability of individual benchmarking and reduces systematic biases in neuroimaging studies.
  • ComBatLS offers a robust solution for harmonizing diverse neuroimaging datasets, facilitating multi-site research.