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Updated: Jun 16, 2025

An R-Based Landscape Validation of a Competing Risk Model
Published on: September 16, 2022
Comparison of Cox regression and generalized Cox regression models to machine learning in predicting survival of
Jia-Jia Qin1, Xiao-Xiao Zhu1, Xi Chen1
1Department of Medical Public Health, Center for Medical Statistics and Data Analysis of Xuzhou Medical University, Xuzhou, China.
Insights
A new machine learning model accurately predicts prognosis for pediatric diffuse large B-cell lymphoma (DLBCL). This tool aids clinicians in making informed treatment decisions for children with DLBCL.
Area of Science:
- Pediatric Oncology
- Hematologic Malignancies
- Machine Learning in Medicine
Background:
- Pediatric diffuse large B-cell lymphoma (DLBCL) incidence is rising globally.
- Children's immature immune systems lead to unique DLBCL prognoses compared to adults.
- Multicenter retrospective analysis is crucial for understanding pediatric DLBCL prognosis.
Purpose of the Study:
- To develop and validate a predictive model for pediatric DLBCL prognosis.
- To identify key prognostic variables in childhood DLBCL.
- To establish a tool for accurate clinical prognosis prediction in pediatric DLBCL.
Main Methods:
- Retrospective analysis of 836 pediatric DLBCL patients (2000-2019) from the SEER database.
- Utilized Cox stepwise regression, generalized Cox regression, and eXtreme Gradient Boosting (XGBoost) for variable selection and model construction.
- Model performance evaluated using C-index, AUC, sensitivity, specificity, calibration curves, and decision curve analysis (DCA).
Main Results:
- Machine learning models, particularly the integrated approach, demonstrated high accuracy (AUC > 0.7).
- The developed nomogram showed strong predictive performance and clinical practicability.
- XGBoost effectively ranked the importance of prognostic variables.
Conclusions:
- An integrated machine learning model combining XGBoost with Cox and generalized Cox regression accurately predicts pediatric DLBCL prognosis.
- This model offers a multidimensional approach to prognosis prediction for childhood DLBCL.
- Findings provide a scientific foundation for precise clinical prognosis prediction in pediatric DLBCL.
Background:
The incidence of diffuse large B-cell lymphoma (DLBCL) in children is increasing globally. Due to the immature immune system in children, the prognosis of DLBCL is quite different from that of adults. We aim to use the multicenter large retrospective analysis for prognosis study of the disease.
Methods:
For our retrospective analysis, we retrieved data from the Surveillance, Epidemiology and End Results (SEER) database that included 836 DLBCL patients under 18 years old who were treated at 22 central institutions between 2000 and 2019. The patients were randomly divided into a modeling group and a validation group based on the ratio of 7:3. Cox stepwise regression, generalized Cox regression and eXtreme Gradient Boosting (XGBoost) were used to screen all variables. The selected prognostic variables were used to construct a nomogram through Cox stepwise regression. The importance of variables was ranked using XGBoost. The predictive performance of the model was assessed by using C-index, area under the curve (AUC) of receiver operating characteristic (ROC) curve, sensitivity and specificity. The consistency of the model was evaluated by using a calibration curve. The clinical practicality of the model was verified through decision curve analysis (DCA).
Results:
ROC curve demonstrated that all models except the non-proportional hazards and non-log linearity (NPHNLL) model, achieved AUC values above 0.7, indicating high accuracy. The calibration curve and DCA further confirmed strong predictive performance and clinical practicability.
Conclusions:
In this study, we successfully constructed a machine learning model by combining XGBoost with Cox and generalized Cox regression models. This integrated approach accurately predicts the prognosis of children with DLBCL from multiple dimensions. These findings provide a scientific basis for accurate clinical prognosis prediction.
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