Quantifying biomolecular organisation in membranes with brightness-transit statistics
Falk Schneider1,2, Pablo F Cespedes3, Narain Karedla3,4
1Kennedy Institute for Rheumatology, Roosevelt Drive, University of Oxford, Oxford, OX3 7LF, United Kingdom. falkschn@usc.edu.
We developed a new method, brightness-transit statistics (BTS), to measure how biomolecules organize, move, and form groups within cells. This technique reveals CD40 can form groups in vitro but not on B cells.
Area of Science:
- Cell biology
- Biophysics
- Molecular dynamics
Background:
- Cellular homeostasis depends on plasma membrane biomolecular interactions.
- Quantifying biomolecular organization, diffusion, and oligomerization remains a challenge.
Purpose of the Study:
- Introduce and validate the brightness-transit statistics (BTS) method.
- Elucidate biomolecular diffusion and oligomerization dynamics.
- Investigate CD40 ectodomain and endogenous CD40 oligomerization.
Main Methods:
- Utilized fluorescence fluctuation spectroscopy.
- Combined brightness and transit time analysis.
- Validated with in silico simulations, supported lipid bilayers, and primary B cells.
Main Results:
- The BTS method quantifies diffusion and oligomerization.
- CD40 ectodomain shows potential for concentration/ligand-dependent oligomerization in vitro.
- No mobile CD40 oligomers were observed on primary B cells.
Conclusions:
- BTS provides sensitive, quantitative, and visual analysis of biomolecular organization.
- CD40 oligomerization dynamics differ between in vitro and cell-surface conditions.
- The method offers a powerful tool for studying membrane protein organization.
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