Fusing multi-scale functional connectivity patterns via Multi-Branch Vision Transformer (MB-ViT) for macaque brain
Jingchao Zhou1, Yuzhong Chen1, Xuewei Jin1
1The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China.
We developed a novel deep learning model, Multi-Branch Vision Transformer (MB-ViT), to accurately predict macaque brain age (BA) from resting state functional magnetic resonance imaging (rs-fMRI) data. This tool aids in understanding brain development and diseases in primate models.
Area of Science:
- Neuroscience
- Artificial Intelligence
- Primate Research
Background:
- Brain age (BA) reflects brain maturity and is crucial for understanding development and neuropsychiatric disorders.
- Predicting BA in macaque models is vital due to their importance in biomedical research.
- Current methods for BA prediction in macaques are limited.
Purpose of the Study:
- To develop and validate a deep learning model for accurate macaque brain age prediction.
- To identify key brain regions and functional connections contributing to age prediction.
- To establish a foundation for studying age-related brain changes in primate models.
Main Methods:
- Utilized resting state functional magnetic resonance imaging (rs-fMRI) data from 450 rhesus macaques.
- Developed a novel Multi-Branch Vision Transformer (MB-ViT) model to fuse multi-scale brain functional connectivity (FC) patterns.
- Employed Gradient-weighted Class Activation Mapping (Grad-CAM) for identifying discriminative brain regions and connections.
Main Results:
- The MB-ViT model achieved high accuracy in predicting macaque brain age, with a correlation of 0.82 between predicted and chronological age (CA).
- Outperformed baseline models in terms of lower MAE and MSE, and higher PCC and R².
- Identified primary motor cortex (M1), visual cortex, posterior cingulate cortex (area v23), and dysgranular temporal pole as key predictive regions.
Conclusions:
- The MB-ViT model offers an effective and accurate method for predicting brain age in primates.
- This approach provides a valuable tool for future research into age-related neurological conditions in macaque models.
- The findings contribute to advancing our understanding of brain aging across species.
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