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Updated: Jun 15, 2025

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
Published on: October 13, 2023
Harnessing the Core Propagation Phenomenon Ontology to Develop a Knowledge Graph for Tracking Health-Related
Gabriel H A Medeiros1, Lina F Soualmia1, Cecilia Zanni-Merk1
1Univ Rouen Normandie, INSA Rouen Normandie, Normandie Univ, LITIS UR 4108, FR-76000 Rouen, France, https://litislab.fr/page/contac.
Abstract:
Biomedical data analysis and visualization often demand data experts for each unique health event. There is a clear lack of automatic tools for semantic visualization of the spread of health risks through biomedical data. Illnesses such as coronavirus disease (COVID-19) and Monkeypox spread rampantly around the world before governments could make decisions based on the analysis of such data. We propose the design of a knowledge graph (KG) for spatio-temporal tracking of public health event propagation. To achieve this, we propose the specialization of the Core Propagation Phenomenon Ontology (PropaPhen) into a health-related propagation phenomenon domain ontology. Data from the UMLS and OpenStreetMaps are suggested for instantiating the proposed knowledge graph. Finally, the results of a use case on COVID-19 data from the World Health Organization are analyzed to evaluate the possibilities of our approach.
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