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Term Candidate Generation to Enrich Clinical Terminologies with Large Language Models
Amila Kugic1, Stefan Schulz1, Markus Kreuzthaler1
1Institute for Medical Informatics, Statistics and Documentation, Medical University of Graz, Austria.
This study uses clinical documentation to find new terms for International Classification of Diseases, 10th Revision (ICD-10) codes. Leveraging large language models, it enhances clinical terminology and bridges the gap between jargon and standardized codes.
Area of Science:
- Medical Informatics
- Natural Language Processing
- Clinical Terminology
Background:
- Clinical routine documentation offers valuable data for secondary use.
- Identifying comprehensive terms for standardized codes like ICD-10 remains a challenge.
Purpose of the Study:
- To leverage annotated clinical data for identifying additional term candidates for ICD-10 codes.
- To bridge the lexical gap between real-world clinical jargon and standardized terminologies.
Main Methods:
- Log-likelihood analysis of co-occurring de-identified ICD-10 codes and problem list entries in German (approx. 1.9 million).
- Statistical significance threshold set at p < 0.01 to identify seed terms.
- Interfacing with a large language model to harvest additional term candidates.
Main Results:
- The approach successfully identified additional term candidates.
- Performance metrics included MAP@5 for hypernyms (0.801), synonyms (0.723), and hyponyms (0.507).
Conclusions:
- Re-using annotated clinical datasets with large language models is an effective strategy.
- This method enhances the completeness of clinical terminologies by incorporating real-world language.
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