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Updated: Jun 14, 2025

Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models
Published on: December 9, 2016
Splice Variant of Spalax Heparanase Skipping Exon 12
Nicola J Nasser1,2, Eviatar Nevo3, Aaron Avivi3
1Department of Radiation Oncology, NYC Health + Hospitals/Elmhurst, Queens, NY 11373, USA.
Abstract:
The subterranean blind mole rat, Spalax, has evolved significantly over 47 million years to thrive in its underground habitat. A key enzyme in this adaptation is heparanase, which degrades heparan sulfate (HS) in the extracellular matrix (ECM), facilitating angiogenesis and releasing growth factors for endothelial cells. Spalax heparanase has various splice variants influencing tumor growth and metastasis differently. We report a novel splice variant from a hypoxia-exposed kidney sample resulting from exon 12 skipping. This variant maintains the translation frame but lacks enzymatic activity, offering insights into Spalax's unique adaptations.
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