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Updated: Jun 14, 2025

Investigation of the Transcriptional Role of a RUNX1 Intronic Silencer by CRISPR/Cas9 Ribonucleoprotein in Acute Myeloid Leukemia Cells
Published on: September 1, 2019
RUNX1 expression is regulated by a super-enhancer and is a therapeutic target in adult T-cell leukemia/lymphoma
Yuji Kobayashi1, Koji Ando2, Yoshitaka Imaizumi3
1Department of Hematology, Atomic Bomb Disease and Hibakusha Medicine Unit, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, Japan.
Abstract:
Super-enhancers (SEs) play an important role in regulating tumor-specific gene expression. JQ1, a Bromodomain-containing protein 4 (BRD4) inhibitor, exerts antitumor effects by disrupting SE-mediated regulation of gene expression. We investigated the anti-adult T-cell leukemia/lymphoma (ATL) effects of JQ1. JQ1 induced apoptosis and inhibited ATL cell proliferation. JQ1 suppressed RUNX1expression through the disruption of SE-mediated gene regulation. In the previous reports, it was shown that IC50s of AI-10-104 and Ro5-3335, RUNX1 inhibitors were 1-10 µM for lymphoblastic leukemia cell lines carrying RUNX1 mutations. In the present study, we demonstrated that IC50s of AI-10-104 and Ro5-3335 were also 1-10 µM or lower for ATL cell lines. Simultaneously, AI-10-104 suppressed MYC proto-oncogene (c-MYC) expression. RUNX1 is a potential therapeutic target for ATL that promotes c-MYC expression. We showed that RUNX1 expression is regulated via SEs in ATL and that RUNX1 may be a novel therapeutic target for ATL.
Insights
Bromodomain-containing protein 4 (BRD4) inhibitor JQ1 shows anti-adult T-cell leukemia/lymphoma (ATL) effects by suppressing RUNX1 expression via super-enhancers. RUNX1 may be a novel therapeutic target for ATL.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Super-enhancers (SEs) are crucial for tumor-specific gene expression.
- Bromodomain-containing protein 4 (BRD4) inhibitors, like JQ1, disrupt SE-mediated gene regulation and show antitumor potential.
- Adult T-cell leukemia/lymphoma (ATL) is a distinct lymphoid malignancy with limited therapeutic options.
Purpose of the Study:
- To investigate the anti-ATL effects of JQ1.
- To explore the role of SEs in regulating gene expression in ATL.
- To identify novel therapeutic targets for ATL.
Main Methods:
- Treatment of ATL cell lines with JQ1.
- Assessment of apoptosis and cell proliferation.
- Analysis of RUNX1 and c-MYC expression levels.
- Evaluation of RUNX1 inhibitors AI-10-104 and Ro5-3335.
Main Results:
- JQ1 induced apoptosis and inhibited proliferation in ATL cells.
- JQ1 suppressed RUNX1 expression by disrupting SE-mediated regulation.
- RUNX1 inhibitors AI-10-104 and Ro5-3335 demonstrated IC50s of 1-10 µM or lower in ATL cells.
- AI-10-104 suppressed c-MYC expression, suggesting RUNX1 promotes c-MYC.
Conclusions:
- RUNX1 expression is regulated by SEs in ATL.
- RUNX1 is a potential therapeutic target for ATL, as it promotes c-MYC expression.
- JQ1 and RUNX1 inhibitors show promise as therapeutic agents for ATL.
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