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Updated: Jun 14, 2025

Oligopeptide Competition Assay for Phosphorylation Site Determination
Published on: May 18, 2017
The pro-drug C13 activates AMPK by two distinct mechanisms
Jordana B Freemantle1, Dinesh Shah1, Dylan M Lynch2
1Division of Cell Signalling and Immunology, Sir James Black Centre, School of Life Sciences, University of Dundee, Dundee DD1 5EH, U.K.
Abstract:
The AMP-activated protein kinase (AMPK) is a sensor of cellular energy status that is expressed in almost all eukaryotic cells. In the canonical activation mechanism, it is activated by increases in AMP:ATP and ADP:ATP ratios that signify declining cellular energy status. Once activated, AMPK phosphorylates numerous targets that promote catabolic pathways generating ATP, while inhibiting anabolic and other processes that consume ATP, thus acting to restore energy homeostasis. Pharmacological agents that activate AMPK have been useful in identifying downstream targets and have potential as drugs for treatment of metabolic disorders such as Type 2 diabetes and non-alcoholic fatty liver disease. One such agent is C13, a pro-drug with a phosphonate bis(isobutyryloxymethyl) ester moiety, with the isobutyryloxymethyl groups increasing membrane permeability. Following cellular uptake, C13 is cleaved to release C2, an AMP analogue and potent AMPK activator that is specific for complexes containing the α1 (but not the α2) catalytic subunit isoform. This has previously been assumed to be the sole mechanism by which C13 activates AMPK, with potential roles for the isobutyryloxymethyl groups being ignored. We now report that, following cleavage from C13, these protective groups are metabolized to formaldehyde, an agent that inhibits mitochondrial function and increases cellular AMP:ATP ratios, thus providing additional AMPK activation by the canonical mechanism.
Insights
AMP-activated protein kinase (AMPK) activators like C13 have a dual mechanism. Beyond releasing an AMP analogue, C13
Area of Science:
- Biochemistry
- Cellular Metabolism
- Pharmacology
Background:
- AMP-activated protein kinase (AMPK) regulates cellular energy homeostasis.
- AMPK is activated by increased AMP:ATP and ADP:ATP ratios.
- Pharmacological AMPK activators are explored for metabolic disorders like Type 2 diabetes.
Purpose of the Study:
- To elucidate the complete mechanism of AMPK activation by the pro-drug C13.
- To investigate the role of C13's ester moieties in AMPK activation.
Main Methods:
- Investigated the metabolic fate of C13 pro-drug components.
- Assessed the impact of C13 metabolites on cellular AMP:ATP ratios.
- Evaluated the effect of metabolites on mitochondrial function and AMPK activation.
Main Results:
- C13 is cleaved to release C2, an AMP analogue, and isobutyryloxymethyl groups.
- These groups are metabolized to formaldehyde, inhibiting mitochondrial function.
- Formaldehyde increases cellular AMP:ATP ratios, leading to canonical AMPK activation.
Conclusions:
- C13 activates AMPK through a dual mechanism: direct activation by C2 and indirect activation via formaldehyde.
- This provides a more comprehensive understanding of C13's pharmacological action.
- Highlights potential for novel therapeutic strategies targeting metabolic diseases.
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