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Genome-level therapeutic targets identification and chimeric Vaccine designing against the Blastomyces dermatitidis
Sawvara Mursaleen1, Asifa Sarfraz1, Muhammad Shehroz2
1Department of Biochemistry, Bahauddin Zakariya University, Multan-66000, Pakistan.
Abstract:
Blastomyces dermatitidis is a thermally dimorphic fungus that can cause serious and sometimes fatal infections, including blastomycosis. After spore inhalation, a pulmonary infection develops, which can be asymptomatic and have lethal effects, such as acute respiratory distress syndrome. Its most common extra-pulmonary sites are the central nervous system, bones, skin, and genito-urinary systems. Currently, no vaccine has been approved by the FDA to prevent this infection. In the study, a peptide-based vaccine was developed against blastomycosis by using subtractive proteomics and reverse vaccinology approaches. It focuses on mining the whole genome of B. dermatitidis, identifying potential therapeutic targets, and pinpointing potential epitopes for both B- and T-cells that are immunogenic, non-allergenic, non-toxic, and highly antigenic. Multi-epitope constructs were generated by incorporating appropriate linker sequences. A linker (EAAAK) was also added to incorporate an adjuvant sequence to increase immunological potential. The addition of adjuvants and linkers ultimately resulted in the formation of a vaccine construct in which the number of amino acids was 243 and the molecular weight was 26.18 kDa. The designed antigenic and non-allergenic vaccine constructs showed suitable physicochemical properties. The vaccine's structures were predicted, and further analysis verified their interactions with the human TLR-4 receptor through protein-protein docking. Additionally, MD simulation showed a potent interaction between prioritized vaccine-receptor complexes. Immune simulation predicted that the final vaccine injections resulted in significant immune responses for the T- and B-cell immune responses. Moreover, in silico cloning ensured a high expression possibility of the lead vaccine in the E. coli (K12) vector. This study offers an initiative for the development of effective vaccines against B. dermatitidis; however, it is necessary to validate the designed vaccine's immunogenicity experimentally.
Insights
A novel peptide-based vaccine against Blastomyces dermatitidis was designed using computational methods. This vaccine shows promise for preventing blastomycosis, a serious fungal infection, pending experimental validation.
Area of Science:
- Mycology
- Immunology
- Vaccine Development
- Computational Biology
Background:
- Blastomyces dermatitidis causes severe, potentially fatal infections like blastomycosis.
- Current treatments for blastomycosis are limited, and no FDA-approved vaccine exists.
- Pulmonary infection can lead to severe outcomes, with common spread to the central nervous system, bones, skin, and genito-urinary systems.
Purpose of the Study:
- To design a novel peptide-based vaccine against Blastomyces dermatitidis using subtractive proteomics and reverse vaccinology.
- To identify and select immunogenic, non-allergenic, and non-toxic epitopes for B- and T-cell responses.
- To computationally evaluate the vaccine construct's properties, interactions, and potential efficacy.
Main Methods:
- Subtractive proteomics and reverse vaccinology to mine the B. dermatitidis genome for vaccine targets.
- In silico design of multi-epitope constructs with linkers and adjuvant sequences.
- Protein structure prediction, protein-protein docking (TLR-4), molecular dynamics (MD) simulation, immune simulation, and in silico cloning (E. coli K12).
Main Results:
- A 243-amino acid, 26.18 kDa vaccine construct with favorable physicochemical properties was designed.
- The vaccine construct demonstrated potent interactions with the human TLR-4 receptor and stable complex formation via MD simulation.
- Immune simulations predicted significant T- and B-cell immune responses, and in silico cloning indicated high expression potential.
Conclusions:
- The study presents a promising in silico designed peptide-based vaccine candidate against Blastomyces dermatitidis.
- The designed vaccine exhibits favorable interactions with the immune system's TLR-4 receptor and elicits predicted robust immune responses.
- Further experimental validation is crucial to confirm the immunogenicity and efficacy of this novel vaccine construct.
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