Metabolic phenotyping combined with transcriptomics metadata fortifies the diagnosis of early-stage Hepatocellular carcinoma
- Sun Jo Kim 1, Cheol Woon Jung 2, Nguyen Hoang Anh 3, Young Cheol Yoon 2, Nguyen Phuoc Long 4, Soon-Sun Hong 5, Eun Ju Cho 6, Sung Won Kwon 7
- 1Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul 08826, Republic of Korea; College of Pharmacy, Chonnam National University, Gwangju 61186, Republic of Korea.
- 2College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
- 3Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul 08826, Republic of Korea; College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
- 4Department of Pharmacology and PharmacoGenomics Research Center, Inje University College of Medicine, Busan 47392, Republic of Korea.
- 5Department of Biomedical Science, College of Medicine, and Program in Biomedical Sciences and Engineering, Inha University, Incheon 22332, Republic of Korea.
- 6Department of Internal Medicine and Liver Research Institute, Seoul National University College of Medicine, Seoul 03080, Republic of Korea.
- 7Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul 08826, Republic of Korea; College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea; Plant Genomics and Breeding Institute, Seoul National University, Seoul 08826, Republic of Korea.
- 0Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul 08826, Republic of Korea; College of Pharmacy, Chonnam National University, Gwangju 61186, Republic of Korea.
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View abstract on PubMed
Summary
This summary is machine-generated.Alpha-fetoprotein (AFP) has low sensitivity for early hepatocellular carcinoma (eHCC) detection. A new panel of serum metabolites combined with AFP significantly improves eHCC diagnosis accuracy.
Area Of Science
- Biomarker Discovery
- Metabolomics
- Hepatocellular Carcinoma (HCC) Research
Background
- Alpha-fetoprotein (AFP) exhibits low sensitivity for early hepatocellular carcinoma (eHCC) surveillance.
- There is a critical need for sensitive, blood-based biomarkers for eHCC detection.
Purpose Of The Study
- To identify a panel of serum metabolites as noninvasive diagnostic indicators for eHCC.
- To evaluate the diagnostic performance of a combined metabolite panel and AFP model.
Main Methods
- Serum samples from normal controls (NC), cirrhosis patients, and eHCC patients were analyzed using four metabolomic platforms.
- A meta-analysis of eHCC transcriptomic datasets was integrated with metabolic findings.
- A diagnostic model was developed incorporating a panel of 11 key metabolites and AFP.
Main Results
- Ninety-four metabolites significantly correlated with disease progression.
- Integrated analysis highlighted metabolic pathways including bile acid biosynthesis and amino acid metabolism.
- The combined metabolite panel and AFP model achieved 81.8% accuracy, significantly outperforming AFP alone (45.4%).
Conclusions
- Circulating metabolite panels show significant promise for the diagnosis of eHCC.
- The combined metabolite and AFP approach offers enhanced diagnostic accuracy for eHCC.
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