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Updated: Jun 13, 2025

Building Up a High-throughput Screening Platform to Assess the Heterogeneity of HER2 Gene Amplification in Breast Cancers
Published on: December 5, 2017
Proteomics based selection achieves complete response to HER2 therapy in HER2 IHC 0 breast cancer
Laura E Johnston1, Jamie Randall1, Safae Chouraichi1
1Inova Schar Cancer Institute, Inova Health System, 8081 Innovation Park Dr, Fairfax, VA, USA.
Abstract:
Recent trials have shown the efficacy of trastuzumab deruxtecan (T-DXd) in HER2-negative patients, but there is not yet a way to identify which patients will best respond, especially with the inability of current HER2 IHC and FISH assays to accurately determine HER2 expression in the unamplified setting. Here, we present a heavily pre-treated patient with triple-negative breast cancer (HER2 IHC 0 who had a complete response to T-DXd. In this case, we used a CLIA-certified reverse-phase protein array-based proteomic assay (RPPA) to determine that the patient had moderate HER2 protein expression (HER2Total 2+, 42%) and activation (HER2Y1248 1+, 23%). Using these results, we determined that the patient may benefit from T-Dxd despite being traditionally qualified as HER2 IHC 0. These findings highlight the potential for proteomics-based assays that may more accurately quantitate HER2 and (its activation) in the HER2 unamplified/IHC 0 setting to better select patients whose tumors are classically molecularly defined as HER2 IHC 0, but still could respond to HER2-directed therapy, and give patients access to therapies which for which they otherwise would not be eligible.
Insights
A proteomic assay identified HER2 protein expression in a patient with HER2-negative breast cancer, leading to a complete response to trastuzumab deruxtecan (T-DXd) therapy. This suggests proteomics can identify patients who may benefit from T-DXd despite traditional HER2-negative classifications.
Area of Science:
- Oncology
- Molecular Biology
- Proteomics
Background:
- Trastuzumab deruxtecan (T-DXd) shows efficacy in HER2-negative cancers, but patient selection remains challenging.
- Current HER2 assays (IHC, FISH) may inaccurately assess HER2 expression in unamplified tumors.
Purpose of the Study:
- To investigate the utility of a proteomic assay in identifying HER2 expression in a HER2-negative patient.
- To explore potential biomarkers for predicting T-DXd response in traditionally HER2-negative breast cancer.
Main Methods:
- Case study of a heavily pre-treated triple-negative breast cancer patient with HER2 IHC 0.
- Utilized a CLIA-certified reverse-phase protein array (RPPA) for proteomic analysis.
- Quantified total HER2 protein expression and HER2 activation (pY1248).
Main Results:
- The patient, initially HER2 IHC 0, showed moderate HER2 protein expression (HER2Total 2+, 42%) and activation (HER2Y1248 1+, 23%) via RPPA.
- Achieved a complete response to T-DXd therapy.
- Proteomic findings suggested eligibility for T-DXd despite conventional HER2-negative status.
Conclusions:
- Proteomics-based assays may offer a more accurate method for quantifying HER2 expression and activation in HER2 unamplified/IHC 0 settings.
- This approach could identify patients eligible for HER2-directed therapies like T-DXd who might otherwise be excluded.
- Highlights the potential of advanced proteomic techniques for personalized cancer treatment selection.
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