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Localizing Protein in 3D Neural Stem Cell Culture: a Hybrid Visualization Methodology
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k* Distribution: Evaluating the Latent Space of Deep Neural Networks Using Local Neighborhood Analysis.

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    We introduce the k* distribution, a new method for visualizing neural network latent spaces. It preserves local structure, unlike t-SNE or UMAP, revealing distinct sample distributions for better network understanding.

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    Area of Science:

    • Machine Learning
    • Data Visualization
    • Artificial Intelligence

    Background:

    • Traditional dimensionality reduction techniques like t-SNE and UMAP distort local neighborhood structures in neural network latent spaces.
    • This distortion hinders the clear visualization and analysis of sample distributions within specific classes.

    Purpose of the Study:

    • Introduce the k* distribution and its visualization technique to preserve local neighborhood structures.
    • Enable detailed analysis of how neural networks process different classes within their latent spaces.
    • Provide a more profound understanding of contemporary visualization methods for neural network latent spaces.

    Main Methods:

    • Developed the k* distribution and a corresponding visualization technique.
    • Utilized local neighborhood analysis to ensure the preservation of sample distribution structures for individual classes.
    • Compared k* distributions to analyze class processing within neural networks.

    Main Results:

    • Identified three distinct sample distributions in latent spaces: fractured, overlapped, and clustered.
    • Demonstrated that sample distributions significantly vary across different classes within a neural network.
    • Showcased the applicability of the k* distribution analysis across diverse network architectures, layers, input transformations, and data splits (training/testing).

    Conclusions:

    • The k* distribution offers a superior method for visualizing neural network latent spaces by preserving local structure.
    • This technique facilitates a deeper understanding of intra-class and inter-class relationships within learned representations.
    • The k* distribution is a valuable tool for analyzing and understanding the internal workings of various neural network models.