The tyrosine kinase inhibitor Nintedanib induces lysosomal dysfunctionality: Role of protonation-dependent

Elena Mosca1, Anja Federa2, Christine Pirker1

  • 1Center of Cancer Research, Comprehensive Cancer Center, Medical University of Vienna, Borschkegasse 8a, 1090, Vienna, Austria.

PubMed

Insights

Nintedanib (NIN) forms crystalline structures in acidic lysosomes, impacting cell function independently of kinase inhibition. This lysosomal microcrystallization contributes to NIN

Area of Science:

  • Cell Biology
  • Pharmacology
  • Biophysics

Background:

  • Nintedanib (NIN) is a multi-tyrosine kinase inhibitor used for idiopathic pulmonary fibrosis and lung cancer.
  • NIN exhibits protonation-dependent lysosomotropic behavior and unique lysosome-specific fluorescence.
  • The underlying mechanism for these properties and their impact on lysosome function remain unclear.

Purpose of the Study:

  • To investigate the spontaneous formation of Nintedanib matter within acidic cellular compartments.
  • To determine if this matter formation underlies NIN's emissive properties and affects lysosome functionality.
  • To explore the consequences of NIN-induced lysosomal changes on cellular processes and potential adverse effects.

Main Methods:

  • Cellular experiments using Nintedanib and non-protonatable derivatives.
  • Analysis of lysosomal birefringence, fluorescence emission, and vATPase inhibitor sensitivity.
  • In vitro crystallization of NIN under varying pH conditions, coupled with spectroscopic and microscopic analysis.
  • Assessment of lysosomal functionality, autophagy, lipid metabolism, and phospholipidosis in treated cells.
  • In vivo studies in mice orally treated with Nintedanib.

Main Results:

  • Lysosomes treated with NIN, but not its derivatives, showed pH-dependent, spontaneous formation of crystalline NIN structures.
  • These crystalline structures exhibited fluorescence and birefringence, co-localizing within lysosomes.
  • Nintedanib-induced lysosomal crystallization impaired lysosomal function, caused vacuolization, enhanced autophagy, deregulated lipid metabolism, and induced phospholipidosis.
  • Nintedanib also induced phototoxicity dependent on lysosomal microcrystallization.
  • NIN crystalline structures were observed in the gut mucosa of treated mice.

Conclusions:

  • Nintedanib spontaneously forms crystalline matter within acidic lysosomes, leading to unique emissive properties.
  • This kinase inhibition-independent impact on lysosomal functionality drives several of NIN's cell biological activities.
  • Lysosomal microcrystallization of Nintedanib may contribute to its observed adverse effects and phototoxicity.

Related Concept Videos

Lysosomal Hydrolases01:22

Lysosomal Hydrolases

Lysosomes are the site for the degradation of macromolecules and biological polymers released during membrane trafficking events such as secretory, endocytic, autophagic, and phagocytic pathways. The membrane-enclosed area of the lysosome, called the lumen, contains hydrolytic enzymes active in an acidic environment. These acid hydrolases are functional at a pH between 4.5 and 5 and are involved in cellular processes such as cell signaling, energy metabolism, restoration of the plasma membrane,...
3.8K
Protein Kinases and Phosphatases02:54

Protein Kinases and Phosphatases

Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
13.1K
Transducer Mechanism: Enzyme-Linked Receptors01:27

Transducer Mechanism: Enzyme-Linked Receptors

Enzyme-linked receptors are cell-surface receptors acting as an enzyme or associating with an enzyme intracellularly. They make excellent drug targets. Drugs can bind to the extracellular ligand-binding domain or directly affect their enzymatic domain and alter their activity.
Major types that are helpful drug targets include:
2.4K
Phosphorylation01:02

Phosphorylation

The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
50.1K
Delivery Pathways to the Lysosome01:36

Delivery Pathways to the Lysosome

Eukaryotic cells use different mechanisms to eliminate toxic waste obsolete and worn-out substances. Lysosomes play a pivotal role in this, and hence, these substances are carried to the lysosome from other parts of the cell and extracellular space through different pathways. The most elaborately studied pathways to the lysosome are the endocytic pathways.
Endocytosis
In endocytosis, the cell membrane takes up macromolecules and particles from the surrounding medium. Clathrin-mediated...
6.2K